CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DESHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = -1 Query: 292 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLS 768 HM+ T+ +D P R+PR G G L + P +GK IL EG + ++G G +V C+ AA L+ + + TV + R+ PLD + I + A + +ITVE+ + GG GS V L G+ D ++ D Y+D G+ + + GLS Sbjct: 455 HMLYTSLQLDG-PVALRYPRSVGQGVELTEELRELP--VGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLTDVVVERLGY---DEYVDQGAISLLHQGYGLS 608
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 46/166 (27.71%), Postives = 78/166 (46.99%), Query Frame = -1 Query: 244 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 738 D P R+P+ A L + + GKG ++ + +A++ GS+V+ VL L + T+ +ARF PLD +++ QL H + +T+EE GGFG V FL +K ++ +P+ +++HG E+ GL + I + G K Sbjct: 465 DGPIAIRYPKNT---AYLGLEDHKKEIIYGKGELIASEEEIALIAIGSMVETAVLVREHLHKLGLKATLVNARFISPLDEEMLHQLTKSHTLFVTMEENVKRGGFGEEVSVFLCEHDYQG--IKHLNISIPNMFVEHGDRTLLKEKLGLDAESIVDKICRQRGMQK 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACFR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 44/149 (29.53%), Postives = 82/149 (55.03%), Query Frame = -1 Query: 325 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQD-ISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 765 ++ TA + D P R+PRG G +++ + +GKGR L +G+ +A++ G + + A ++ ISV D RF KPLD +L+ ++ + ++T+E+G + GG G + F+ +G ++R + +PD++I+HGS Sbjct: 467 LMYTAQLPDKGPFAIRYPRGRG--SLVDWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMGCAILEFMADNGYYP---EIRRIGVPDQFIEHGS 610
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACFN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 44/149 (29.53%), Postives = 82/149 (55.03%), Query Frame = -1 Query: 325 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQD-ISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 765 ++ TA + D P R+PRG G +++ + +GKGR L +G+ +A++ G + + A ++ ISV D RF KPLD +L+ ++ + ++T+E+G + GG G + F+ +G ++R + +PD++I+HGS Sbjct: 467 LMYTAQLPDKGPFAIRYPRGRG--SLVDWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMGCAILEFMADNGYYP---EIRRIGVPDQFIEHGS 610
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Kitasatospora griseola GN=dxs2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = -1 Query: 256 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVA---ILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 753 A + D P+ R+ +GN +G +P +++ + D A I+ G++ C+ AA +L Q IS TV D R+ KP+D L LA +H +++TVE+ G GG GS + L + D + LR +P ++DH S + L+E GL++ I+ + +L+ Sbjct: 461 AVEVADAPTVVRYSKGN-VGPAVPAVGTVGGMDVLRRPEADSADEAADVLIVSIGAMAPTCLEAAELLAQQGISSTVVDPRWVKPVDAAL-PGLAAQHRLVVTVEDNGRAGGVGSAIAQALRDA---DVDVPLRDFGIPQEFLDHASRGEILDEIGLTAPAIAKKIEALV 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_THEP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 50/162 (30.86%), Postives = 84/162 (51.85%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A +H+I+ITVEE +GGFGS V L G K+ ++ + D ++ HG + L GL S ++ TVL+ + Sbjct: 449 DGPVAIRYPKESFYGEVESILENMKKIDLG-WKILRRGKEAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDIIITVEEAMRIGGFGSFVAQRLQEMGWQG---KIVNVGVEDLFVPHGGRKELLSTLGLDSEGLTKTVLTYI 599
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACV8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 48/170 (28.24%), Postives = 87/170 (51.18%), Query Frame = -1 Query: 262 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQD-ISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 765 ++ TA + D P R+PRG G +++ +EIGKGR L EG +A++ G + Q A + + S+ D RF KPLD ++ ++ + ++TVE+G + GG GS + F+ + + +++ + LPD+++ HGS + G+ I ++S Sbjct: 467 LMYTAQLPDKGPFVIRYPRGRG--SLVDWKCPMQEIEIGKGRKLKEGKDIAVITLGPIGVQAEKAITHAEQETGKSIAHYDLRFLKPLDESMLHEIGKRFKQVVTVEDGVLKGGMGSAILEFMADN---EYNPQIKRIGLPDQFVQHGSVKELYHICGMDEEGIYKVLIS 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_THEMA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga maritima GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A +H+++ITVEE +GGFGS V L G K+ ++ + D ++ HG + L GL S ++ TVL+ + Sbjct: 449 DGPVAIRYPKESFYGEVESLLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDLIITVEEAMKIGGFGSFVAQRLQEMGWQG---KIVNLGVEDLFVPHGGRKELLSMLGLDSEGLTKTVLTYI 599
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CORJK (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium jeikeium (strain K411) GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 51/167 (30.54%), Postives = 91/167 (54.49%), Query Frame = -1 Query: 265 AAVIDDRPSCFRFPRGN---GIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 753 A +DD P+ RFP+G+ GI AV ++ E + EG RV I+ +G++ +Q + AA L + S TV D + P D + + A ++++T+E+ V GG GS + + L+ +GI + +R++ +P ++ HGS + LE+ GL + ++ TV+ Sbjct: 465 AVAVDDAPTVVRFPKGDAPAGIPAVREEDDYDVLFEQSGDK--SEG-RVLIVSFGALSKQALGAAQALCDANFSATVVDPHWVVP-TADSLLEFARGFDLIVTIEDNGVHGGAGSRLHYDLSQAGI---DVPVRNLGVPQEFLAHGSRGEVLEDLGLDAETVARTVV 624
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides thetaiotaomicron GN=dxs PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 44/169 (26.04%), Postives = 88/169 (52.07%), Query Frame = -1 Query: 265 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQD-ISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 765 ++ TA + D P R+PRG G+ ++ + +GKGR L +G +A++ G + + A +S+ S+ D RF KPLD +L+ ++ ++T+E+G++ GG GS V F+ + ++ + +PD+++ HG+ A+ + G+ ++ +L Sbjct: 467 LMYTAQLPDKGPFVLRYPRGRGV--LVDWKCPLEEIPVGKGRKLKDGKDIAVISIGPIGNKARSAIARAESESGRSIAHYDLRFLKPLDEELLHEVGRTFRHIVTIEDGTIQGGMGSAVLEFMADH---EYTPTVKRIGIPDKFVQHGTVAELYQLCGMDEDSLTKELL 630 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |