CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CHLMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia muridarum GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = -1 Query: 262 NNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 678 N +P+ G+ +L +GD + ++ G + + L IS TV D F KPLDT+L++ L + H ++ +EE S+ GG + FL + L S+ +PD +I HG+P L GL+S I+ +L+ Sbjct: 486 NPSFSPIFPGEAEVLCQGDDLLLIALGHMCDTALAVKEQLLDHGISTTVVDPIFIKPLDTELLQTLLSHHSKVVVLEEHSIHGGLSAEFLLFLNNHNLKTDVL---SLGIPDIFIPHGNPETILNMIGLTSDQITLKILA 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_AZOPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=dxs PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 40/148 (27.03%), Postives = 78/148 (52.70%), Query Frame = -1 Query: 280 RFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 720 R+P+G G + L +GKGR L EG +A++ G++ A +++ ISV D + KP+D +L+ ++ + ++ +E+G++ GG G+ V F+ +G K++ + +PD +I HG+ A+ + G+ + I Sbjct: 482 RYPKG--YGELKNWEYSFEALPVGKGRKLKEGKEIAVVSIGTIGNLARKAIRLVEKLGISVAHYDMIYLKPIDEELLHEIGKNYRCVVVIEDGTIKGGLGTAVIEFMVQNGY---DPKIKQIGVPDEFIPHGTIAELYKLCGMDIKSI 624
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MACCJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Macrococcus caseolyticus (strain JCSC5402) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12 Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = -1 Query: 280 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKG--RILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 768 H++ A + P R+PRGNG G + P + +G +L EG V +L +G ++ L + +S+ V +ARF KPLD + A + ++TVEE + GGFG+ + + + LD + ++ + + D YI+HG + L++ G++ ++ Sbjct: 455 HLLYNAFYEYEGPIAIRYPRGNGYGVKID----SIPNSVVRGDWEVLHEGTDVIVLSFGPTLKLIEAVREELLKEGVSIEVVNARFIKPLDYHYLAAAAKRNIPVLTVEEAMLSGGFGAAISNHYS---DLDLDVHVKRIGIDDEYIEHGDVSMLLDDIGINKANL 613
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MYCA9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12 Identity = 48/164 (29.27%), Postives = 86/164 (52.44%), Query Frame = -1 Query: 268 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEI-GKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 753 A +DD P+ RFP+G +G +P + ++I + + D V ++ GS + A+ L Q I VTV D R+ P+ ++ +LA +H +++T+E+ V GG GS V + + D + R + +P ++++H S LEE GL+ +HI+ + Sbjct: 460 ALAVDDGPTALRFPKGE-VGEDIPAIERRDGVDILARPASGLHAD-VLLVAVGSFASTALATADRLGKQGIGVTVVDPRWVLPVPPHVV-ELAGQHRLVVTLEDSGVHGGAGSAVTAAMQDA---DVDIPSRDIGVPQQFLEHASRGQVLEELGLTDQHIARKI 617
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOK5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 44/160 (27.50%), Postives = 80/160 (50.00%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P R+PRG + P + E G+ ++ ++A++ G +V+ VLAA L+ I V V A F KPLD ++++L E +IT+E+ + GG GS++ ++ L + + ++ D ++ HG P+ + GL + I VL ++ Sbjct: 466 PIAIRYPRGGDNVYLTPLED----FEFGRWEYILNKGKIALVAQGRMVEHAVLAAEKLEQMGILVRVISACFIKPLDKVMLKKLIEEDVTIITIEDNIIRGGLGSYILEYV---NTLHRKVDVINLGFKDEFVRHGKPSILYKLYGLDTGSIVDKVLKVV 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOK1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 44/160 (27.50%), Postives = 80/160 (50.00%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P R+PRG + P + E G+ ++ ++A++ G +V+ VLAA L+ I V V A F KPLD ++++L E +IT+E+ + GG GS++ ++ L + + ++ D ++ HG P+ + GL + I VL ++ Sbjct: 466 PIAIRYPRGGDNVYLTPLED----FEFGRWEYILNKGKIALVAQGRMVEHAVLAAEKLEQMGILVRVISACFIKPLDKVMLKKLIEEDVTIITIEDNIIRGGLGSYILEYV---NTLHRKVDVINLGFKDEFVRHGKPSILYKLYGLDTGSIVDKVLKVV 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HELPJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori J99 GN=dxs PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 45/166 (27.11%), Postives = 83/166 (50.00%), Query Frame = -1 Query: 244 DDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 741 D P FR+PRG+ A+ + + +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S + FL+ IL ++S + D +I HG+ A + GL + ++ +L LG+ + Sbjct: 458 DSSPCAFRYPRGSF--ALKEGVFEPSGFVLGRSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDHNLSAIIAPYQKLYVFSDNYKLGGVASAILEFLSEQNILK---PVKSFEITDEFIMHGNTALVEKSLGLDTESLTDAILKDLGQER 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HELPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain HPAG1) GN=dxs PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 45/166 (27.11%), Postives = 83/166 (50.00%), Query Frame = -1 Query: 244 DDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 741 D P FR+PRG+ A+ + + +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S + FL+ IL ++S + D +I HG+ A + GL + ++ +L LG+ + Sbjct: 458 DSSPCAFRYPRGSF--ALKEGVFEPSGFVLGRSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIIAPYQKLYVFSDNYKLGGVASAILEFLSEQNILK---PVKSFEIMDEFIMHGNTALVEKSLGLDTESLTDAILKDLGQER 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DEIGD (1-deoxy-D-xylulose-5-phosphate synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=dxs PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = -1 Query: 253 PSCFRFPRGNGIGAVLPXNNKGTPLEI--GKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 732 P R+PRGN + +GT E+ G L +GD V IL G ++ + AA L V V +ARF KPLD ++R++A + L+TVE+ + VGGFGS V L+ G+ +R + +PD + DH + +G+ + I TVL+ LG Sbjct: 477 PFAIRYPRGN-----VERVPEGTWPELRWGTWERLQDGDDVVILAGGKALEYALKAARDLPG----VGVVNARFVKPLDQGMLREVATKARALVTVEDNTVVGGFGSAVLEALSALGL---RTPVRVLGIPDAFQDHATVESVHARAGIDAPAI-RTVLAELG 626
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MARMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Marinomonas sp. (strain MWYL1) GN=dxs PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11 Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDR-VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRG G G + + + L+IGK R L G + I G+G + AAN L + T+ D RF KP+D + + + ++++TVEE ++ GG GS V L + I L L LPD+Y +H S A L+ GL + I ++ Sbjct: 473 PAAVRYPRGTGQGVDI--ESTLSTLKIGKSRTLRTGQSGIVICGFGRPTYDALKAANTLDA-----TLLDMRFVKPIDEETL-LTHRDAKLIVTVEENAIMGGAGSAVSELLIANNINIPTLHLG---LPDQYEEHASHASMLKRVGLDADGIQKSI 618 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |