CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NOCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11 Identity = 47/165 (28.48%), Postives = 86/165 (52.12%), Query Frame = -1 Query: 265 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDR-VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 753 A +DD P+ RFP+G+ + + G G ++ G + V ++ G++ V A L +Q I VTV D R+ KP+D ++ +LA EH +++++E+ G GG G+ + L +G+ P +L +P +++ H A LE GL+ + I+ ++ Sbjct: 460 AVEVDDAPTVVRFPKGSPPEDIEAVDRAG-----GADILVRNGTKDVLVVAVGAMGTTAVDVAQRLTAQGIGVTVVDPRWVKPVDPAIV-ELAREHRLVVSIEDNGETGGCGAVLLQTLNAAGV-HTPFRLHG--IPQQFLGHAKRAAILERIGLTPQAIALRIV 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NITSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11 Identity = 47/163 (28.83%), Postives = 84/163 (51.53%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 DRP FR+PRG+ +L + P E+GK +L+E + V +GYG+ V + A +K D V++ D RF KPLD +L+++L+ + + + + +GG S + L+ P+++ + D++I HG D + GL + ++ V S + Sbjct: 450 DRPCAFRYPRGS---FILDDEFEAKPFELGKAELLVESEGDVLFVGYGNGVGR---AYETMKHIDEPVSLLDLRFVKPLDVELLQELSKRYRQWFVFSDSAKLGGVASALLE-------LELPVEIVTFEYEDQFIPHGKVIDVEKALGLLPQQLAKRVKSFI 599
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HELPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain G27) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11 Identity = 46/169 (27.22%), Postives = 82/169 (48.52%), Query Frame = -1 Query: 244 DDRPSCFRFPRGNGI---GAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 741 D P FR+PRG+ + G P +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S + FL+ IL ++S + D +I HG+ A + GL + ++ +L LG+ + Sbjct: 458 DSSPCAFRYPRGSFVLKEGVFEPSG-----FVLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIVAPYQKLYVFSDNYKLGGVASAILEFLSEQNILK---PVKSFEIIDEFIMHGNTALVEKSLGLDTESLTDAILKDLGQER 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HELPY (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11 Identity = 45/166 (27.11%), Postives = 83/166 (50.00%), Query Frame = -1 Query: 244 DDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 741 D P FR+PRG+ A+ + + +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S + FL+ IL ++S + D +I HG+ A + GL + ++ +L LG+ + Sbjct: 458 DSSPCAFRYPRGSF--ALKEGVFEPSGFVLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIVAPYQKLYVFSDNYKLGGVASAILEFLSEQNILK---PVKSFEIIDEFIMHGNTALVEKSLGLDTESLTDAILKDLGQER 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHOSR (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus sp. (strain RHA1) GN=dxs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = -1 Query: 268 AAVIDDRPSCFRFPR---GNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 753 A +DD P+ RFP+ G+ + AV + L GR + V I+ G+ + AA L+ Q IS TV D R+ P+ L++ LA ++ +++TVE+ G GG GS V L +G+ + R + +P +++DH S A E GL+++ ++ + Sbjct: 461 ALAVDDGPTALRFPKGTVGDDVPAVSRLDGVVDILRAPSGR-----NDVLIVSVGAFAGLALAAAERLEQQGISATVVDPRWVLPVPESLVK-LAEDYTMVVTVEDSGLHGGVGSTVSAALRAAGV---DVPCRDLGVPQQFLDHASRAQIHAELGLTAQDVARQI 617
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ARTS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Arthrobacter sp. (strain FB24) GN=dxs PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = -1 Query: 262 AAVIDDRPSCFRFPRGNGIGA---VLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 753 A I+D P+ R+ +GN +GA L + G + + E D V I+ G++ + + +N L +Q IS TV D R+ P+ +I LA H ++I +E+G GG GS + + +G+ L + LP ++DHG+ A LE GL++R I+ V++ Sbjct: 469 AVAIEDAPTVVRYSKGN-VGAEVEALERLSDGVDVLARRPAGSSEND-VLIVSVGAMSELALDVSNRLGAQGISSTVVDPRWLLPVRKSII-ALAARHRLVICIEDGVRAGGVGSRIRQEMRAAGV---DTALNEVGLPVEFLDHGTRAQVLERVGLTARQITHDVVA 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MYCSS (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain MCS) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 44/160 (27.50%), Postives = 82/160 (51.25%), Query Frame = -1 Query: 268 IDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 744 ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS V L + + + R + LP ++ DH S + L + G++ R+IS + Sbjct: 462 VNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MYCSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain KMS) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 44/160 (27.50%), Postives = 82/160 (51.25%), Query Frame = -1 Query: 268 IDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 744 ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS V L + + + R + LP ++ DH S + L + G++ R+IS + Sbjct: 462 VNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MYCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain JLS) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 44/160 (27.50%), Postives = 82/160 (51.25%), Query Frame = -1 Query: 268 IDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 744 ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS V L + + + R + LP ++ DH S + L + G++ R+IS + Sbjct: 462 VNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CORGB (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium glutamicum (strain R) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = -1 Query: 256 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 753 A IDD P+ RFP+G+ ++ + +++ E D V I+ G + A+ + ++VTV D R+ P+ L+ L+++H+++IT+E+G + GG GS + L S + D P R + +P +Y+DH S ++ + GL + I TV+ L Sbjct: 462 AISIDDGPTVVRFPKGDLPTPIVAIDTLEDGVDVLAYEDATEDDAPSVLIVAVGERATVALEVASRITQHGVNVTVVDPRWIVPIPQSLVA-LSDDHDLVITIEDGVIHGGVGSLLSDALNASEV-DTPR--RQIAVPQKYLDHASRSEVFADYGLDADGIETTVVGWL 626 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |