CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLAMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = -1 Query: 262 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDR-VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 753 A +DD P+ RF +G+ +G + + L+ G + + V I+ G + + A L +Q I TV D R+ P+ ++ +L H +++T+E+G V GG G+ + L +GI G +L LPD ++DHG+ + LE GL+ +HI+ V++ Sbjct: 463 AVKVDDAPTVVRFSKGS-VGDEIEAVRR---LDDGVDVLHESASKDVLIVTVGPMATMGIEVAERLAAQGIGATVVDPRWVVPVPRSVV-ELGGTHRLVVTIEDGVVVGGIGTRIRQDLREAGIDTGVTELG---LPDEFLDHGTRSQILERVGLTPQHIARDVVA 620
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HELHP (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter hepaticus GN=dxs PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 45/168 (26.79%), Postives = 82/168 (48.81%), Query Frame = -1 Query: 268 VATAAVIDDRPSCFRFPRGNGI--GAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 762 VA A +D P FR+PRG+ V N +G+ +L G ++ ++GYG+ V + L ++ ++ D RF KPLD ++ ++ H I + + +GG S + F+ I D ++L+S + DR++ HG+ A + GL + H+ + + Sbjct: 464 VAFAYRYNDSPCAFRYPRGSFTLEEGVFVSNE----FVLGQAEMLKRGKKILLVGYGNGVGRAYKVYQALITEGYEPSLLDLRFVKPLDKHMLNEVFKTHTHICVFSDSYYMGGVASALLEFMAEENIKD--VQLKSFEIKDRFVPHGNTALIEQSLGLDTPHLVSKI 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS1_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Kitasatospora griseola GN=dxs1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = -1 Query: 274 VATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME---GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISA 762 V A ++D P+ RFP+G +G P + IG +L V ++ G + C+ AA +L + I+ TV D + KP+D L+ +LA H +++TVE+ G GG G+ + + + + D P LR + +P ++ H S + LEE GL+ ++A Sbjct: 458 VRQAVAVEDAPTVVRFPKGE-LGPEAPAIER-----IGGVDVLARTGPAPDVLLVAVGPMAAACLDAAALLAADGITATVVDPCWVKPVDPALV-ELAGAHRMVVTVEDNGRTGGVGAALAQAMRDADV-DTP--LRDLGIPQEFLAHASRGEILEEIGLTGTGVAA 614 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |