CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.514e-38 Identity = 80/171 (46.78%), Postives = 114/171 (66.67%), Query Frame = -1 Query: 256 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 768 HM TAA D P FR+PRG GIG LP + LEIGKGRI+ G +VA+L G+ +++ AA+ L+++ +S T+AD RF KPLDT+LI QL HE+++T+EE S+GG G+HV + + G+ D LK+R+M LPD +I+ +P Q +E+GL++ HI TVL L Sbjct: 460 HMTYTAAEHDSGPIAFRYPRGGGIGIDLPETPE--KLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKAL 628
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.287e-38 Identity = 92/179 (51.40%), Postives = 117/179 (65.36%), Query Frame = -1 Query: 244 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILM---EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 768 HM+AT DD PS RFPRG G+G P +G L IGKGRI+ EGD +A+L G+ + C+ AA L++ +VTVADARF KPLD +L+ +LA H L+TVEEGSVGGFGSHV +T G+LD G +K+R+MVLPD YID + A QL +GL + I A V LLG+ K Sbjct: 459 HMMATMVAFDDGPSAVRFPRGEGVGVERP--ERGEVLPIGKGRIVHGTGEGD-IALLSLGTRLAACLDAAERLEAAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAK 634
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.551e-38 Identity = 83/178 (46.63%), Postives = 113/178 (63.48%), Query Frame = -1 Query: 235 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 768 HMV TAAV D P R+PRGNG+G LP + L IGKGRI+ EG VA+L G+ + + + AA+ L + +S TVAD RF KPLD +I+ L HE+ +T+EEG++GG G+HV + G++DG LKLR+M LPD + +H P Q E+GL + I ATVL+ L R + L Sbjct: 460 HMVHTAAVHDSGPIALRYPRGNGVGVALPAAPER--LAIGKGRIVREGKTVALLSLGTRLGEALRAADQLDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGL 635
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 9.551e-38 Identity = 88/179 (49.16%), Postives = 111/179 (62.01%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDR-------VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 H ATA D P FR+PRGNGIG LP KG LEIGKGRI+ E R VAIL G + + + AA+ L +Q + VTVADARF KP+D L+ LA +HE+ IT+EEG++GGF S V L +G+LD +K R M LPDRYIDH + Q E++GL++ HI T LG Sbjct: 477 HATATACEYDAGPIAFRYPRGNGIGLDLP--EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRMHESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLD-KVKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 652
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.247e-37 Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 MV TAA D P R+PRG G+G +P + + PL IGKGRI+ EG VA+L G+ +Q C+ A +L ++ ++ TVADARF KP D +L+ LA HE+LI VEEG++GGF SHV +L G+LDG LKLR++ +PDR+ +H +P Q ++G+ ++ I+ VL L Sbjct: 463 MVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.202e-34 Identity = 78/171 (45.61%), Postives = 108/171 (63.16%), Query Frame = -1 Query: 256 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 768 HM TAA D P FR+PRGNG G LP + LEIGKGR++ EG VAIL G+ + + + AA+ L+++ +S +V D RF KPLD +LIR+ HE+ +TVEEGS+GG G+HV + G++D LKLR++ LPD + D P Q + +GL++ I TVL L Sbjct: 460 HMTYTAAEHDAGPIAFRYPRGNGTGVALPAVPQ--KLEIGKGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKAL 628
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.659e-31 Identity = 72/173 (41.62%), Postives = 106/173 (61.27%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 +MV + A D P R+PRGNG+G L + P IGKGR++ G +VAIL G+ +++ + AA+ L +Q +S +VAD RF KPLD L RQL H+++IT+EEG++GGF + V + G++D LK+R++ LPDR+ Q E+GL + I A V+S L R Sbjct: 460 NMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHR 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.297e-30 Identity = 71/173 (41.04%), Postives = 105/173 (60.69%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 +MV + A D P R+PRGNG+G L + P IGKGR++ G +VAIL G+ +++ + AA+ L +Q +S +VAD RF KPLD L RQL H+++IT+EEG++GGF + V + G++D LK+R++ LPDR+ Q E+GL + I A V + L R Sbjct: 460 NMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQR 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MAGSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetococcus sp. (strain MC-1) GN=dxs PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.170e-27 Identity = 77/173 (44.51%), Postives = 106/173 (61.27%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HM+ TA ++ +P R+PRG +G LP LEIG+GR L +G+ AIL G V + AA +L+ Q ISV+V DARF KPLD L++++A H +++ VEE +V GGFGS V L+ G LD LK+R M +PDRYI HG+ + E GL + I+ T+ LLG Sbjct: 455 HMLHTAVALN-KPVALRYPRGTALG--LPPEPPHV-LEIGRGRTLRKGEHAAILAVGQPVHPALEAAAILEQQGISVSVYDARFVKPLDQRLLQEVAM-HGVVLVVEENAVQGGFGSAVLESLSNQGALDRGLKIRCMGIPDRYIPHGTQKELRGEIGLDAVGIATTLKELLG 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_VIBVY (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=dxs PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = -1 Query: 250 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 732 PS R+PRGNG+G P ++ T LEIGKGR++ +G++VAIL +G+ + + AA L + TVAD RF KPLD LIRQLANEH++LIT+EE ++ GG G+ V F+ I+ L L LPD++I G+ + EE GL ++ I + L + Sbjct: 470 PSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFLANALEAAEALNA-----TVADMRFVKPLDEALIRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |