CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_VIBVU (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus GN=dxs PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = -1 Query: 250 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 732 PS R+PRGNG+G P ++ T LEIGKGR++ +G++VAIL +G+ + + AA L + TVAD RF KPLD L+RQLANEH++LIT+EE ++ GG G+ V F+ I+ L L LPD++I G+ + EE GL ++ I + L + Sbjct: 470 PSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFLANALEAAEALNA-----TVADMRFVKPLDEALLRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CYAP8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=dxs PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.690e-26 Identity = 71/171 (41.52%), Postives = 98/171 (57.31%), Query Frame = -1 Query: 259 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSL 765 M+ T D P R+PRGNGIG +P +G PL IGKG IL GD + ILGYG++V + AA L+ I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V + +L + L+ +PDR +DH +P + GL+S I+ +L + Sbjct: 460 MIVTGVNYTDGPIAMRYPRGNGIG--VPLMEEGWEPLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGIEATVVNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPLKRFGVPDRLVDHATPDQSKADLGLTSPQIAEQILQV 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.882e-26 Identity = 73/169 (43.20%), Postives = 100/169 (59.17%), Query Frame = -1 Query: 265 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 765 MV T P RFPRGNG G +P +G PLEIGKG IL GD V I+GYG++V + AA +L I TV +ARF KPLDT+LI LA + ++T+EEG V GGFGS V L + ++ + ++ + +PD ++H +P + E GL+SR I+ VL Sbjct: 460 MVVTGIEYTTGPIAMRFPRGNGYG--VPLMEEGWEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDADVV---VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.917e-26 Identity = 73/169 (43.20%), Postives = 100/169 (59.17%), Query Frame = -1 Query: 265 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 765 MV T P RFPRGNG G +P +G PLEIGKG IL GD V I+GYG++V + AA +L I TV +ARF KPLDT+LI LA + ++T+EEG V GGFGS V L + ++ + ++ + +PD ++H +P + E GL+SR I+ VL Sbjct: 460 MVVTGIEHTTGPIAMRFPRGNGYG--VPLMEEGWEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDADVV---VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.387e-26 Identity = 70/149 (46.98%), Postives = 95/149 (63.76%), Query Frame = -1 Query: 295 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 738 D P R+PRG+G GA LP + PL IGKG G R+A+L +G++V + A L +TVAD RF +PLD LIR+LA+ H++L+TVEE +V GG GS V +L +G LD P +R + LPDR++DHG+PA+ L E GL Sbjct: 468 DGPFAVRYPRGSGPGAALPEADLD-PLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEAL-----DLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAG-LDVP--VRHLGLPDRFVDHGTPAELLAEVGL 607
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.095e-25 Identity = 70/168 (41.67%), Postives = 98/168 (58.33%), Query Frame = -1 Query: 268 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 765 MV T P R+PRG+G+G +P +G PL IGK +L G V IL YGS+V + AA +LK IS TV +ARF KPLDT+LI LA + +++TVEEG +GGFGS V L + D + L + +PD +++H +P + L E GL+S I+ + Sbjct: 465 MVVTGIQYTQGPIAMRYPRGSGVG--VPLAEEGWEPLPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEALLDA---DLAVPLLRLGVPDVWVEHATPEESLAELGLNSAGIAERI 627
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_THEEB (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxs PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25 Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = -1 Query: 229 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 765 M+ T D P R+PRGNG G L PLEIGKG +L G+ + ++ YGS+V + A +LK +S V +ARF KPLDT+LI LA + ++T+EEG +GGFGS V L + IL L+L +PD ++H SP + + GL+ ++ T++ G P+ A ++ Sbjct: 460 MIVTGINYTDGPIALRYPRGNGYGVALMEEG-WEPLEIGKGELLRSGEDLLLVAYGSMVYPAMQVAEILKEHGMSAAVINARFAKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVLEALQEADILVPVLRLG---VPDILVEHASPDESKADLGLTPPQMAETIMQKFGVPQRATVV 635
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.440e-25 Identity = 70/181 (38.67%), Postives = 101/181 (55.80%), Query Frame = -1 Query: 229 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 765 M+ T D P R+PRGNG+G +P +G L IGKG IL GD + +LGYG++V + A +L I TV +ARF KPLDTDLI LA + ++T+EEG +GGFGS V L +L + ++ +PD+ +DH P + + GL+S I+ VL + +E +I Sbjct: 459 MIVTGVNYTDGPIAMRYPRGNGLG--VPLMEEGWEALPIGKGEILRNGDDLLLLGYGTMVNTAMQVAEILGEHGIEATVVNARFVKPLDTDLIVPLAKQTGKVVTLEEGCLMGGFGSAVAEALLDHNVL---VPVKRFGVPDQLVDHAKPDESFADLGLTSSQIADEVLKSFFKTQEPSVI 634
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_VIBPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio parahaemolyticus GN=dxs PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.436e-25 Identity = 65/162 (40.12%), Postives = 102/162 (62.96%), Query Frame = -1 Query: 250 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 732 PS R+PRG+G+G + + T LEIGKGR++ +G++VAIL +G+ + + AA ++++ TVAD RF KPLD LIRQLA+EH++L+T+EE ++ GG G+ V F+ I+ L L LPD++I G+ + EE GL ++ I ++ L + Sbjct: 470 PSAVRYPRGSGMGTEI--EKEFTALEIGKGRVVRKGEKVAILSFGTFLPNALEAA-----KNLNATVADMRFVKPLDEALIRQLADEHDVLVTLEENAIAGGAGAGVIEFMMKEKIIKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEKSIAEYLAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_GEOSW (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus sp. (strain WCH70) GN=dxs PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.436e-25 Identity = 69/177 (38.98%), Postives = 98/177 (55.37%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 HMV TA DD P RFPRGNG+G L K P IG +L EG +AIL +G+ + + AA L +ISV V +ARF KP+D ++ L + ++T+EE + GGFGS V F G + M +PDR+I+HGS + L E GL++ HI V +++ R ++ Sbjct: 456 HMVYTAIQYDDGPIALRFPRGNGLGVKLDEELKKIP--IGTWEVLREGRDLAILTFGTTISMALEAAEKLAKDNISVKVVNARFIKPMDEKILHDLLESNIPILTIEEAVLQGGFGSAVLEFAHDHGYHQA--VINRMGIPDRFIEHGSVKELLNEIGLTTAHIIDRVKTIIPRKQK 628 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |