CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_LYSSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=dxs PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.273e-25 Identity = 65/177 (36.72%), Postives = 103/177 (58.19%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 HMV TA D P R+PRGNGIG +P +++ L IG +L EG +IL +G+ + + AA+ML Q I + V +ARF KP+D D++ ++ + H+ ++T+EE + GGFGS V F G L+ + M +PD+YI+HG+ LEE +++ A + LL + ++ Sbjct: 456 HMVKTAIEYDGGPIALRYPRGNGIG--VPLDDELVALPIGSWEVLREGKDASILTFGTTIPMAMQAADMLAQQGIDIEVVNARFIKPMDKDMLHRILSNHKPILTIEEAVLKGGFGSGVLEFAHDHGYLNAIVD--RMGIPDQYIEHGNVDQLLEEIHMTAEDAVARMQVLLQQKQQ 628
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_GEOKA (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus kaustophilus GN=dxs PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.273e-25 Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 HMV TA DD P RFPRGNG+G L K P IG +L +G AIL +G+ + + AA+ L ISV V +ARF KP+D ++ +L ++TVEE + GGFGS V F G ++ M +PDR+I+HGS ++ L E GL+S HI + +++ R ++ Sbjct: 454 HMVYTAIRYDDGPIAMRFPRGNGLGVPLDEELKEIP--IGTWEVLRDGCDAAILTFGTTISMALKAADELAKDGISVKVVNARFLKPMDVAMLHELLESRLPILTVEEAVLQGGFGSAVLEFAHDHGYHGAVIE--RMGIPDRFIEHGSVSELLNEIGLTSTHIIDRIKTMVPRKQK 626
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24 Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = -1 Query: 250 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLK--LRSMVLPDRYIDHGSPADQLEESGLSS----RHISATVLSLLGR 765 MV T P R+PRG G+G +P +G P+ IGK +L G V IL YGS+V + AA +LK IS TV +ARF KPLDT+LI LA + +++TVEEG +GGFGS V +LD ++ L + +PD +++H +P + L E GL+S I A V +L G+ Sbjct: 465 MVVTGIQYTKGPIAMRYPRGAGVG--VPLAEEGWEPIPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVG-----EALLDADIRVPLLRLGVPDVWVEHATPEESLAELGLNSVGIAERIRAKVEALQGQ 637
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_GEOTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dxs PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24 Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 HMV TA DD P RFPRGNG+G L K P IG +L +G IL +G+ + + AA L +SV V +ARF KP+D ++ +L ++T+EE + GGFGS V F G ++ M +PDR+I+HGS ++ L+E GL++ H++ + +++ R ++ Sbjct: 456 HMVYTALRYDDGPIAMRFPRGNGLGVPLDEELKEIP--IGTWEVLRDGSDAVILTFGTTISMALEAAEQLARDGVSVKVVNARFLKPMDEAMLHELLESRLPILTIEEAVLQGGFGSSVLEFAHDHGYHQAVIE--RMGIPDRFIEHGSVSELLDEIGLTAAHVADRIKTIMPRKQK 628
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CYAA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=dxs PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24 Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = -1 Query: 259 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSL 765 MV T D P R+PRG+G+G +P +G P+ IGKG IL GD V ++GYG++V Q + A +LK I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V L ++ + ++ +PD+ +DH P + + GL+S I+ + L Sbjct: 460 MVVTGINHTDGPIAMRYPRGSGVG--VPLMEEGWEPVSIGKGEILRNGDDVLLVGYGTMVHQSLQVAEILKEHGIEATVVNARFVKPLDTELIVPLAQRIGKVVTLEEGCLMGGFGSAVAEALLDHDVV---VPIKRFGVPDKLVDHAKPDESKADLGLTSPQIAEEIRQL 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CUPTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dxs PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24 Identity = 74/174 (42.53%), Postives = 102/174 (58.62%), Query Frame = -1 Query: 253 TAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 756 T A D P+ R+PRG+G GA + + P+ +GKG + E G RV L +GS+VQ + AA L + TVAD RF KPLD L+++LA +H+ L+TVEEGSV GG GS V L +GI D P + ++ LPDR++DHG PA L++ GL + I +V G Sbjct: 462 TTAFQQDCPTAVRYPRGSGPGAAIAADL--APVPVGKGVVRREAGARAGHRVGFLAFGSMVQPALGAAEALDA-----TVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGSAVLEALAEAGI-DKP--VLTLGLPDRFVDHGDPAFLLQQCGLDAAGIERSVRERFG 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs2 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.066e-24 Identity = 72/180 (40.00%), Postives = 102/180 (56.67%), Query Frame = -1 Query: 232 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALL 768 HM+ TA + RP R+PRG G G LP + LEIG+G +L EGD VAI+ GS V AA +L+++ I TV +ARF KPLD +LI A ++TVEE ++ GGFGS V L G+ D ++ + + +PDR+I+ G ++ GL I+ATV + L +A L Sbjct: 457 HMLKTA-IYAGRPVALRYPRGAGYG--LPLDQTIQSLEIGRGELLTEGDDVAIVAIGSTVYPAQEAAKLLEARGIRATVVNARFVKPLDRELILGAARRTGCIVTVEENALQGGFGSAVLELLADEGMTD--VRAKRIGIPDRFIEQGPQPQLRKDLGLDGAGIAATVEAFLTAKGQAAL 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MICAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dxs PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.698e-24 Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = -1 Query: 241 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 765 MV T P R+PRGNG+G +P +G L IGKG IL GD + +LGYG++V + A +L I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V L + IL + ++ +PD+ +DH +P + + GL+S I+ VL+ K+ Sbjct: 460 MVVTGINHTSGPIAMRYPRGNGLG--VPLMEEGWEALPIGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEHGIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAVLEALQDANIL---VPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLAAFFSQKQ 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_VIBHB (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dxs PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.010e-24 Identity = 65/162 (40.12%), Postives = 101/162 (62.35%), Query Frame = -1 Query: 250 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 732 PS R+PRG+G+G + + T LEIGKGRI+ +G++VAIL +G+ + + AA ++++ TVAD RF KPLD LIRQLA EH++L+T+EE ++ GG G+ V F+ I+ L L LPDR++ G+ + E+ GL ++ I ++ L + Sbjct: 470 PSAVRYPRGSGMGTDIEKDF--TALEIGKGRIVRKGEKVAILSFGTFLGNALEAA-----ENLNATVADMRFVKPLDEALIRQLAAEHDVLVTLEENAIAGGAGAGVIEFMMQDKIIKPVLNLG---LPDRFVPQGTQDELHEDLGLDAKGIEKSINDYLAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_THERP (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxs PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.025e-23 Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = -1 Query: 256 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 768 HM+ATA ++ P R+PRG+G+G +P + L IG+ +L EG VAI+ G+ V AA++L + I TV +ARF KPLD LI A E L+TVEE + GGFGS V L +G+L L+L L DR+ DH S A ++G+ + I++ L+ L Sbjct: 449 HMLATALAYEEGPIALRYPRGSGVG--VPMLGEPRVLPIGRAELLREGSDVAIVALGATVLPAERAADILAERGIRATVINARFVKPLDRSLILDAARECGCLVTVEEAQLAGGFGSAVLETLADAGLLIPVLRLG---LADRFFDHASQASLRRQAGIDAESIASRTLAFL 615 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |