CX043880

Overview
NameCX043880
Unique NameCX043880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.008e-30
Identity = 75/170 (44.12%), Postives = 101/170 (59.41%), Query Frame = -3
Query:  281 NLPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTD---KRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 760
            NLP P S   V+ + FR    +   + VALSGGHT G   C    +RLY      K DPTLDK++ + L+K CP + + +  V FD+R+P +FDNKYYV+L   +GL+ SDQ+L++      T  +V ++A  Q  FF  F  +MI+M  LS  TGKQGEIR  C V NS
Sbjct:  161 NLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVNS 330          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.702e-30
Identity = 69/175 (39.43%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  272 FDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNT--TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNL 790
            F+SK      NLP    +   +L+ F++  F  +E VALSGGHT+G +HC  F+NR++PK DP L+  FA  LK  C   ++N T     D  +P  FDN Y+ +L    GLL SD  L+ D  TR  V  +A +Q+ FF++FA +M K+ ++ V   K GE+R +C   N  N+
Sbjct:  152 FESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFNKLNV 326          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.493e-29
Identity = 70/167 (41.92%), Postives = 103/167 (61.68%), Query Frame = -3
Query:  281 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT-DKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 760
            N+P+P +    IL+ F  +  +  + VALSG HT+G + C +F  RLY +      D TL+++FA NL++ CP S  +   +V DI S   FDN Y+ +L+  +GLL SDQ L++ ++++R +V  +A DQ  FF++FA SMIKM  +S LTG  GEIR  C   NS
Sbjct:  165 NIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINS 331          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.493e-29
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = -3
Query:  296 PSELFDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 802
            P   FD K        NLPSPF N + ++  F ++ F  ++ VALSG HT+G+A C +F  RL    D +LD TFAN L KTC   D N    FD  + N FDN Y+  L  + G+L SDQ L+   RTR++V  +A++Q+ FF +F  +M KMS L V  G QGE+R  C
Sbjct:  143 PKGRFDGKRSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL-TVPDSSLDSTFANTLSKTCSAGD-NAEQPFDA-TRNDFDNAYFNALQMKSGVLFSDQTLFNTPRTRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGSQGEVRQNC 310          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.326e-29
Identity = 72/167 (43.11%), Postives = 95/167 (56.89%), Query Frame = -3
Query:  281 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIR--SPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 760
            NLP P      +   F  K     E V LSG HT+G +HC +F+NRLY       QDPTLD  +A +LK  CP   +N   V  +   SP++ D  YYVD++  +GL TSDQ L TD  T + V   A +  L+  +FA++M+KM QL VL G+ G+IRA C V NS
Sbjct:  196 NLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLVVPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVINS 362          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.344e-29
Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = -3
Query:  281 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 760
            +LP P S+   +L+ + +K  N  + VALSG HT+G A C +F + +Y   D  ++  FA +L+  CP + S      D  +PN FDN YY +L++++GLL SDQ+L+    T S V SFA   S F   FA +M+KM  LS  TG QG+IR  C   NS
Sbjct:  163 DLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIY--NDTNINSAFAASLRANCPRAGSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSCWKVNS 320          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.674e-29
Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = -3
Query:  284 VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRS-IVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 766
            ++NLPSPF+N + ++  F+ K  + ++ V LSGGHT+G  HCP  TNRLY        DP LD  +A  L+  C  +D+      D  S   FD  Y+  +  R+GL  SD  L  ++ T+S ++ S   D S FF++F  SM+KM ++ VLTG+ GE+R KC + N
Sbjct:  163 LLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPTDTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.410e-29
Identity = 70/167 (41.92%), Postives = 99/167 (59.28%), Query Frame = -3
Query:  284 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCP-TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDK--RTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 760
            N+P+P S    +L  F+ K  N  + V+LSGGHT+G+A C  F  RLY +      D TL++++   L+  CP T   NN +  D+ SP  FDN Y+  L+  +GLLTSD+ L T    +T ++V ++A D+ LFFQ+FA SM+ M  +  LTG  GEIR  C V N
Sbjct:  180 NIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.678e-29
Identity = 73/182 (40.11%), Postives = 105/182 (57.69%), Query Frame = -3
Query:  245 NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVVE 760
            NLP+PF     + + FR    N + + VALSGGHT G   C    +RLY        DPTL+ T+   L+  CP + + +  V FD+R+P +FDNKYYV+L  ++GL+ SDQ+L++      T  +V SFA     FF  F  +M +M  ++ LTG QG+IR  C V NSN+L   + +VV+
Sbjct:  167 NLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHDMVEVVD 348          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.651e-28
Identity = 65/161 (40.37%), Postives = 94/161 (58.39%), Query Frame = -3
Query:  284 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 757
            LP P S    ++N FR    + R+ VALSG HT+G A C  F +R+Y      +D +FA + +++CP    S  NN  + D+R+P  FD  Y++ L+N +GLLTSDQ L+    T SIV S++     F+++F  +MIKM  +S LTG  G+IR  C   N
Sbjct:  167 LPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIY--NSTNIDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFNGGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRRPN 325          
The following BLAST results are available for this feature:
BLAST of CX043880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_ARMRU3.008e-3044.12Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER41_ARATH6.702e-3039.43Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER49_ARATH1.493e-2941.92Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER47_ARATH1.493e-2943.27Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER5_VITVI3.326e-2943.11Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER66_MAIZE4.344e-2941.25Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER56_ARATH5.674e-2939.52Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER9_ARATH7.410e-2941.92Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER1A_ARMRU9.678e-2940.11Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER68_ARATH1.651e-2840.37Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14A06-B12-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043880 ID=CX043880; Name=CX043880; organism=Citrus sinensis; type=EST; length=864bp
TACCGGGCCCCCTTTTGCCAAACTTTATGAAATATGAACAACATACTGTT
ATTTAGAATTGCTAATTTGATTACTAGTGAACATATATACTAACTGGCAA
GTAGCTTTATTGACAGAATTCAAACTAGACAAGCGCAAGCAAGACAACGA
AACAAAACAGACTAACACAAAGAAACAAGCAACGTTAACCGGAACCTGAG
GCTAGGTGGGTAGCTAGATTTTAGATAATCCCAGACCAAGCCTCTTCAAC
TACATCCTCAACAACAGAAGCCAAATTATTGGAATTCTTGACGGAGCACT
TGGCTCTAATCTCTCCTTGCTTCCCCGTGAGCACACTCAACTGCGACATC
TTTATCATCGAATTGGCAAACTCTTGAAAGAAGAGTGACTGGTCCACAGC
AAAGCTCGTGACAATGCTCCTCGTTCTCTTGTCCGTGTAAAGATCCTGGT
CCGACGTCAGCAACCCCTGTCGGTTCATCAAGTCAACGTAGTACTTGTTG
TCGAACACGTTCGGGGACCGGATGTCGAAGACGGTGGTGTTGTTGGAATC
CGAAGTGGGGCATGTCTTTTTGAGATTGTTGGCGAATGTTTTGTCCAGTG
TGGGGTCTTGTTTGGGATAGAGGCGATTGGTGAATGCAGGGCAGTGAGCT
AGCCCAACGGTGTGCCCGCCGGAGAGGGCCACGGTTTCCCTGGCGTTGAA
GGTTTTTTCTCGGAAATCGTTGAGGATCACGGTGGTGTTGCTGAACGGTG
ATGGCAGATTTACCACTGTTGCGAATGTTTTGCTGTCGAATAGCTCAGAT
GGCGAGGAAGCGACGAAGATGGTGATGAGGAAACAAAAAGGCGGCTGGAA
AATTGATTTTTCTG
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