CX043880

Overview
NameCX043880
Unique NameCX043880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.442e-26
Identity = 64/163 (39.26%), Postives = 91/163 (55.83%), Query Frame = -3
Query:  284 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 757
            +PSP +N T +++ F     + ++ VALSG H++G   C +   RLY      K DP L+ ++   L K CP     N T     +P VFDN+Y+ DL++ +G L SDQ LYT+  TR  V  F+ DQ  FF+ FA  M+K+  L   +G+ GEIR  C V N
Sbjct:  159 MPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVN 319          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.495e-26
Identity = 67/174 (38.51%), Postives = 95/174 (54.60%), Query Frame = -3
Query:  284 SKTFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 784
            S T A+V   LP P  +   + + F +   +  + +ALSG HT+G AHC    NR+Y      K DPT++K +   LK +CP +      +  D  +P  FDN YY +L   +GL TSDQ L+TD+R++  V  +A +  LF Q F NSMIK+ ++ V TG  G IR  C   N
Sbjct:  156 SSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.495e-26
Identity = 62/175 (35.43%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  284 SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQ---SLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 784
            SK    ++NLPSPF++   +  +F  K  NA++ V LSGGHT+G++ C    +RLY        DP+++ ++   LK+ CP +D   +   D  S   FD  Y+  +  ++GL TSD  L  D  T++ V + A+     S F ++F++SM+K+  + +LTGK GEIR +C+  N
Sbjct:  151 SKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.001e-25
Identity = 63/162 (38.89%), Postives = 100/162 (61.73%), Query Frame = -3
Query:  296 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTVF-DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT-DKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 760
            ++P+P +    IL  F+ +  +  + V+LSG HT+G + C +F  RLY      K D TL + +A  L++ CP S  + T  F D  +P  FDN Y+ +L+  +GLL+SD+ L+T +K+++ +V  +A +Q  FF++FA SM+KM  +S LTG +GEIR  C
Sbjct:  168 DIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRIC 329          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.001e-25
Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = -3
Query:  284 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY---PKQ--DPTLDKTFANNLKKTCPTS-DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 760
            +LP P      +   F     +  + +ALSG HT+G AHC  F+ R+Y   PK+  DPTL+  +A  L++ CP   D       D  SPN FDN Y+ +L    GL TSDQ L++D+R+RS V SFA  ++ F Q F +++ K+ ++ V TG  GEIR  CS  N
Sbjct:  159 SLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.308e-25
Identity = 68/168 (40.48%), Postives = 97/168 (57.74%), Query Frame = -3
Query:  281 LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT--DKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 757
            LPSPF     +   F +   N   + VALSGGHT G A C   T RLY      + DPTL+ ++  +L++ CP + +    V FD+ +PN FDN++Y +L N +GL+ SDQ+L++     T  +V  ++ +   FF  FA++MI+M  L  LTG QGEIR  C V NS
Sbjct:  138 LPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPRNGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVNS 305          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.708e-25
Identity = 65/167 (38.92%), Postives = 96/167 (57.49%), Query Frame = -3
Query:  284 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-----YPKQDPTLDKTFANNLKKTCPTSDS---NNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 760
            NLP P  N + ++  F  +  + ++ V LSGGHT+G +HC +F +RL     +   DP+++  FA  LKK CP + +   N  TV D  S +VFDN YY  +++ +G+  SDQ L  D RT+ IV +FA DQ  FF+EFA SM+K+    V   + G++R      N
Sbjct:  159 NLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTS-SVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKLGNFGV--KETGQVRVNTRFVN 322          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.708e-25
Identity = 69/168 (41.07%), Postives = 93/168 (55.36%), Query Frame = -3
Query:  281 LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT--DKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 757
            LPSPF     +   F +   N   + VALSGGHT G A C   T RLY      + DPTLD T+   L+  CP + +    V FD+ +PN FD +YY +L N +GL+ SDQ+L++     T  +V  ++ +   FF  F ++MI+M  L  LTG QGEIR  C V NS
Sbjct:  167 LPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQNGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVNS 334          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.231e-25
Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = -3
Query:  284 DSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPT-SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDL-YTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 787
            DS+T    A    LPSP S  + +++ F+    +  + VALSGGHT+G A C +FT RL P Q     +   +  F  +L++ C T   S   T  D+ +P+ FDN+YYV+L++ +GLL SDQ L   D  TR+IV ++A DQS+FF++F N+M+KM    +  G   EIR  C + N
Sbjct:  173 DSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNAMVKMG--GIPGGSNSEIRKNCRMIN 348          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25
Identity = 61/159 (38.36%), Postives = 88/159 (55.35%), Query Frame = -3
Query:  284 PSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV--FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 754
            P P S+ T +   F  K     +   LSGGHT+G + C  F  R+Y   D  +D  FA + +  CP S    T +   D  +PN FDN YY DL++ +GLL SDQ L+      ++V +++ +   FF +FA +++KMS++S LTG  GEIR  C V N
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPSDLTVLSGGHTIGQSECQFFKTRIY--NDTNIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
The following BLAST results are available for this feature:
BLAST of CX043880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER17_ARATH3.442e-2639.26Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER50_ARATH4.495e-2638.51Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER1_ARATH4.495e-2635.43Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER72_ARATH1.001e-2538.89Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER16_ARATH1.001e-2540.00Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PERE5_ARMRU1.308e-2540.48Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER66_ARATH1.708e-2538.92Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER3_ARMRU1.708e-2541.07Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER40_ARATH2.231e-2539.89Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PERX_LUPPO2.914e-2538.36Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14A06-B12-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043880 ID=CX043880; Name=CX043880; organism=Citrus sinensis; type=EST; length=864bp
TACCGGGCCCCCTTTTGCCAAACTTTATGAAATATGAACAACATACTGTT
ATTTAGAATTGCTAATTTGATTACTAGTGAACATATATACTAACTGGCAA
GTAGCTTTATTGACAGAATTCAAACTAGACAAGCGCAAGCAAGACAACGA
AACAAAACAGACTAACACAAAGAAACAAGCAACGTTAACCGGAACCTGAG
GCTAGGTGGGTAGCTAGATTTTAGATAATCCCAGACCAAGCCTCTTCAAC
TACATCCTCAACAACAGAAGCCAAATTATTGGAATTCTTGACGGAGCACT
TGGCTCTAATCTCTCCTTGCTTCCCCGTGAGCACACTCAACTGCGACATC
TTTATCATCGAATTGGCAAACTCTTGAAAGAAGAGTGACTGGTCCACAGC
AAAGCTCGTGACAATGCTCCTCGTTCTCTTGTCCGTGTAAAGATCCTGGT
CCGACGTCAGCAACCCCTGTCGGTTCATCAAGTCAACGTAGTACTTGTTG
TCGAACACGTTCGGGGACCGGATGTCGAAGACGGTGGTGTTGTTGGAATC
CGAAGTGGGGCATGTCTTTTTGAGATTGTTGGCGAATGTTTTGTCCAGTG
TGGGGTCTTGTTTGGGATAGAGGCGATTGGTGAATGCAGGGCAGTGAGCT
AGCCCAACGGTGTGCCCGCCGGAGAGGGCCACGGTTTCCCTGGCGTTGAA
GGTTTTTTCTCGGAAATCGTTGAGGATCACGGTGGTGTTGCTGAACGGTG
ATGGCAGATTTACCACTGTTGCGAATGTTTTGCTGTCGAATAGCTCAGAT
GGCGAGGAAGCGACGAAGATGGTGATGAGGAAACAAAAAGGCGGCTGGAA
AATTGATTTTTCTG
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