CX043880

Overview
NameCX043880
Unique NameCX043880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25
Identity = 69/168 (41.07%), Postives = 93/168 (55.36%), Query Frame = -3
Query:  296 ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFA--NNLKKTCPTSDSNNTTV--FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 772
            A   NLPSPF     I   F     + ++ V LSG HT+G A C    +RL+      + DP L  + A  + LK TCP  DS+++ +   D  S   FDN YYV+LMN  GLL SDQ L TD    ++V S++ +  LF ++FA SM+KM  + V+TG  G IR KC
Sbjct:  179 AANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25
Identity = 64/168 (38.10%), Postives = 94/168 (55.95%), Query Frame = -3
Query:  284 SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 784
            SKT A   +LP PF     +++ F  K  + R+ VALSG HT+G A C  F +R+Y      +D  FA+  ++ CP    N N    D+ +PN FDN Y+ +L+ ++GLL SDQ L+    T +IV+ ++     F  +FA +MIKM  +S L+G+ G IR  C   N
Sbjct:  157 SKTLAET-DLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIY-SNGTDIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVCGSVN 322          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25
Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = -3
Query:  284 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTS-DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 757
            LP P  N   +   F     +  + +ALSG HT+G AHC   + R+Y      + DP++++ +   LK+ CP   D       D  SP  FDN Y+ +L   +GL TSDQ L+TD+R+RS V SFA  +  F Q F  ++ K+ ++ VLTG  GEIR  CS  N
Sbjct:  162 LPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSRVN 325          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25
Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = -3
Query:  275 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRS----PNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNN 757
            LP    + +V+L  F+    +    VAL G H+VG  HC    +RLYP+ DP+L+     ++   CP S  +   V  +R+    P V DN YY ++++ +GLL  D  L  DKRTR IV   A DQ+ FF+EF  ++  +S+ + LTG +GEIR +C++ N N+
Sbjct:  166 LPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25
Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = -3
Query:  284 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTT--VFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA-VDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 760
            N+P PF N T ++  F  +  + ++ V LSG HT+G++HC +F+NRL+       QDP+LD  +A+NLK     S ++NTT    D  S N FD  YY  ++ R+GL  SD  L  +    + V  FA   +  FF EF+NSM KM ++ V TG  GEIR  C+  N
Sbjct:  160 NIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25
Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = -3
Query:  284 LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVF----DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 757
            +P+   + + +++ F     +   TVAL G H+VG  HC    +RLYP  DPTLD ++A  LKK CP+   +   V     D  +P V DN YY ++M  +GLL  D +L TD RT   V   A D + F ++F+  +  +S+ + LTG QGEIR  C   N
Sbjct:  166 IPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.491e-25
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = -3
Query:  284 FREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT-SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY-TDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 715
            F +K  N R+ VALSG HT+G + C  F +RLY +    +D  FA+  K+ CPT     N    D+ +PN FDN YY +LM ++GLL +DQ L+ +   T  IV+ ++ ++S F  +FA +MIKM  +  LTG  GEIR  CS  N
Sbjct:  177 FSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY-ENSSDIDAGFASTRKRRCPTVGGDGNLAALDLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.107e-24
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = -3
Query:  296 DSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDK-RTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 787
            ++    ++ N+PSP S    IL  F  +  +  + VAL G HT+G + C  F  RLY        D TL++ +A+ L++ CP S ++ N    D  +P  FDN YY +L+N +GLL+SD+ L+T    T  +V  +A ++  FF++FA SM+KM  +S LTG  GEIR  C
Sbjct:  167 EASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRIC 337          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.107e-24
Identity = 67/167 (40.12%), Postives = 94/167 (56.29%), Query Frame = -3
Query:  284 LPSPFSNTTVILNDFREKTFNA-RETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSI--VTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 757
            LPSPFS  T +   F +   N   + VALSGGHT G A C   T RLY      + DP+L+ T+   L++ CP + +    V FD  +P  FD +YY +L+N +GL+ SDQ L++     +I  V  ++ +  +FF  F ++MI+M  L  LTG QGEIR  C V N
Sbjct:  167 LPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of CX043880 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.446e-24
Identity = 65/170 (38.24%), Postives = 95/170 (55.88%), Query Frame = -3
Query:  281 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPT-SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTD----KRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS 760
            NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+        D TL+ +  +NL+  CP   +SN T   D  + + FDN Y+ +L+  +GLL+SDQ L++       T+ +V +++  QSLFF++F  +MI+M  +S   G  GE+R  C V N+
Sbjct:  161 NLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVINN 328          
The following BLAST results are available for this feature:
BLAST of CX043880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER10_ARATH2.914e-2541.07Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PERX_NICSY3.806e-2538.10Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER45_ARATH3.806e-2538.41Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER42_ARATH3.806e-2537.58Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER39_ARATH3.806e-2540.12Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER21_ARATH3.806e-2537.65Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER5_ARATH6.491e-2542.47Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER36_ARATH1.107e-2438.01Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER23_ARATH1.107e-2440.12Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER59_ARATH1.446e-2438.24Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14A06-B12-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043880 ID=CX043880; Name=CX043880; organism=Citrus sinensis; type=EST; length=864bp
TACCGGGCCCCCTTTTGCCAAACTTTATGAAATATGAACAACATACTGTT
ATTTAGAATTGCTAATTTGATTACTAGTGAACATATATACTAACTGGCAA
GTAGCTTTATTGACAGAATTCAAACTAGACAAGCGCAAGCAAGACAACGA
AACAAAACAGACTAACACAAAGAAACAAGCAACGTTAACCGGAACCTGAG
GCTAGGTGGGTAGCTAGATTTTAGATAATCCCAGACCAAGCCTCTTCAAC
TACATCCTCAACAACAGAAGCCAAATTATTGGAATTCTTGACGGAGCACT
TGGCTCTAATCTCTCCTTGCTTCCCCGTGAGCACACTCAACTGCGACATC
TTTATCATCGAATTGGCAAACTCTTGAAAGAAGAGTGACTGGTCCACAGC
AAAGCTCGTGACAATGCTCCTCGTTCTCTTGTCCGTGTAAAGATCCTGGT
CCGACGTCAGCAACCCCTGTCGGTTCATCAAGTCAACGTAGTACTTGTTG
TCGAACACGTTCGGGGACCGGATGTCGAAGACGGTGGTGTTGTTGGAATC
CGAAGTGGGGCATGTCTTTTTGAGATTGTTGGCGAATGTTTTGTCCAGTG
TGGGGTCTTGTTTGGGATAGAGGCGATTGGTGAATGCAGGGCAGTGAGCT
AGCCCAACGGTGTGCCCGCCGGAGAGGGCCACGGTTTCCCTGGCGTTGAA
GGTTTTTTCTCGGAAATCGTTGAGGATCACGGTGGTGTTGCTGAACGGTG
ATGGCAGATTTACCACTGTTGCGAATGTTTTGCTGTCGAATAGCTCAGAT
GGCGAGGAAGCGACGAAGATGGTGATGAGGAAACAAAAAGGCGGCTGGAA
AATTGATTTTTCTG
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