DC900408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 58 SYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR 414 SYPY + C++ E V ++ +IP EN++ L GP++ ++A + Y G+ C + ++HGVL+VGYGA G N+ YWIIKNSWG WG GY ++ + R Sbjct: 22 SYPYHAQGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 31 IATEG*XXSSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG-RGMCGMNT 435 +ATE SYPY G+ +C++ +E A V +F IP E + + GP+++ ++A Q Y G+ C + LNH VL+VGYG +G +W++KNSWG++WG GY +L + CG+ T Sbjct: 196 LATE----ESYPYRGQGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEG---EESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIAT 326
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 55 SSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV-HHGPLAIGLNAIFMQTYI--GGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRG-MCGM 429 +SYPY KCQ+DS+ A + +T +P + V + GP+ +G++A ++ GV C +K +NHGVL++GYG L + YW++KNSWG +G+ GY R+ R +G CG+ Sbjct: 201 ASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQK-VNHGVLVIGYGD-------LNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGI 321
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 64 PYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLIC-GKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 429 PY G G C+ ++++ + + +EN++ LV +GP+++ ++ + Y G++ IC + LNH VLLVGYG K + PYWI+KNSWG +WG+ GY+R+ R + CGM Sbjct: 211 PYYGFDGVCKKSPFELSISGSR-RYVLQNENKLRELLVVNGPISVAIDVSDLINYKAGIAD--ICENNEGLNHAVLLVGYGVKN-------DVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 49/129 (37.98%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 58 SYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKK--WLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 429 +YPY GK G C+F K V + NI + DE + + + P++ FM Y G+ C K +NH VL VGYG K PYWI+KNSWG QWG +GY+ + RG+ MCG+ Sbjct: 204 TYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMM-YRTGIYSSTSCHKTPDKVNHAVLAVGYGEKN-------GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 58 SYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNT 435 SYPY C + E A + F +IP E + + GP+++ ++A Q Y G+ C K L+HGVL+VGYG +G N +WI+KNSWG +WG+ GY ++ + + CG+ T Sbjct: 88 SYPYEATDTSCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGT------NNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIAT 210
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 55 SSYPYIGKRGKCQ-FDSEKIAVRVANFT--NIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 429 S YP+ G+C+ F + V V +F+ N E+++A L+ GPL + ++A+ Q Y+GG+ C NH VL+ G+ R GN PYW+++NSWG WG GY + G +CG+ Sbjct: 184 SQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGI-IQHHCSSGEANHAVLITGFD-------RTGNTPYWMVRNSWGSSWGVEGYAHVKMGGNVCGI 303
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15 Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 58 SYPYIGKR-GKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNT 435 SYPY+G+ C + E A F +IP E + + GP+++ ++A Q Y G+ C K L+HGVL+VGYG +G + +WI+KNSWG +WG +GY ++ + + CG++T Sbjct: 201 SYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDS---NSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIST 327
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 43/128 (33.59%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 55 SSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 429 SSYPY + C+FD+ I + E + + GP+++ ++A Q Y GV C +L+HGVL VGYG + + YW++KNSWG WGD GY ++ R R CG+ Sbjct: 192 SSYPYEAEDRSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTES-------TKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGI 312
BLAST of DC900408 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 55 SSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV-HHGPLAIGLNAIFMQTYI--GGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRG-MCGM 429 +SYPY KCQ+DS+ A + +T +P + V + GP+++G++A ++ GV C + +NHGVL+VGYG L + YW++KNSWG +G+ GY R+ R +G CG+ Sbjct: 202 ASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN-VNHGVLVVGYGD-------LNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGI 322 The following BLAST results are available for this feature:
BLAST of DC900408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900408 ID=DC900408; Name=DC900408; organism=Citrus sinensis; type=EST; length=684bpback to top |