CX043849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: LRC40_XENTR (Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis GN=lrrc40 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.089e-14 Identity = 76/233 (32.62%), Postives = 116/233 (49.79%), Query Frame = 1 Query: 19 ISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQIATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLE 717 IS L L L + +NQ++ +P + +L NL+ L+++ NK+ ++P+ L + L+ L L+ N L L + LS L DV NN L SI ++G QL+G + FN L N+LT +P+ IG M+ L LD + N+L +P + + E+LYL NKLT PEL +TKL L + +NQ+ P L L+ L L + N L+ Sbjct: 101 ISLLPALVVLDIHDNQIVS-LPCAIKELTNLQKLNISHNKIK-QLPKELQHLQNLKSLLLQHNQLE-ELPDSIGHLSILEELDVSNNCLR-SISSSVG-------------QLTGLVKFN----------LSSNKLTA-LPTEIGKMKNLKQLDCTSNLLEN-VPASVAGMESLEQLYLRQNKLT--YLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLK 302 HSP 2 Score: 68.1662 bits (165), Expect = 6.302e-11 Identity = 67/230 (29.13%), Postives = 105/230 (45.65%), Query Frame = 1 Query: 166 YWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQ-IATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIP----------------------PALGKLTDLFDLNVANNHLEGPIPDXXXXXXXXXXXXVHGNKL 786 +W + + +N + LS D+ L L D+ +N + S+P I T+ Q L++S+N++ ++P + LQ + +L LQ NQL ++P IG + L LD+S N L I +G L+ K L SNKLT +P E+G M L L+ N L ++P P L LT L +L+V NN ++ P+ + NKL Sbjct: 78 WWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIV-SLPCAIKELTNLQKLNISHNKIK-QLPKELQHLQNLKSLLLQHNQLE-ELPDSIGHLSILEELDVSNNCLRS-ISSSVGQLTGLVKFNLSSNKLTA-LPTEIGKMKNLKQLDCTSNLLE-NVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKL 301
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 394 IATLSLQGNQLTGKIP-SVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGPIPDXXXXXXXXXXXXVHGNKLNGTIPPA 807 + L L G L G IP + +G +++L +L L N+LSG +PP + +L + +YL N +G +P + +L+ L+L+ N TG IP L L L++ NN L GP+P+ + N LNG+IP A Sbjct: 89 VHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVSR--QLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPN--LDTVSLRRLNLSNNHLNGSIPSA 223
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 49/138 (35.51%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 391 QIATLSLQGNQLTGKIP-SVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGPIPDXXXXXXXXXXXXVHGNKLNGTIP 801 ++ L L G+ L G +P IG + L L L N LSGPIP NL LYL N +G IP L + + + L +N+ +G IP + T L L + N L GPIP+ V N+LNG+IP Sbjct: 66 RVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIPE---ITLPLQQFNVSSNQLNGSIP 200
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: SHOC2_CAEEL (Leucine-rich repeat protein soc-2 OS=Caenorhabditis elegans GN=soc-2 PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 76/267 (28.46%), Postives = 128/267 (47.94%), Query Frame = 1 Query: 7 IPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSG-----------------------EIPRLLYWNEV-LQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFL-QIATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGPIPD 732 IP + +QLE I+++N L P+ L+ LP + ++L+ N+L+ +IP ++ L L L+ N LV +L DM + + ++ N L +P++I + ++L LS NQL ++P IG L ++ L L+ N+L +P+ IG +Q L L + N + +P +GNL + L L N LT IP E+G++ L L LNDN ++P L L +++ N+ L P+ Sbjct: 272 IPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELV-SLPLDMGSWTSITELNLSTNQLK-VLPEDIEKLVNLEILVLSNNQLK-KLPNQIGNLNKLRELDLEENELE-TVPTEIGFLQHLTKLWVQSNKIL-TLPRSIGNLCSLQDLRLGENNLTA-IPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPE 532 HSP 2 Score: 74.7146 bits (182), Expect = 6.733e-13 Identity = 79/284 (27.82%), Postives = 126/284 (44.37%), Query Frame = 1 Query: 7 IPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTG----------------------SIPQNIGNCTSFQVLDLSYNQLSGEIPFNIG-FLQIATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLT-----------------------GHIPPEL-GNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLE 717 +P I +L L+ L L N L +P +L+ L +L+ LDL NKL+ E+P ++Y L+ L LR N +V + + LS L DVR N + +P+ IG+C S LDL +N LS E+P++IG + + + ++ N++ IPS + Q L + N L P +L L + L N+LT IP + T+L L L +N+L +P +G T + +LN++ N L+ Sbjct: 111 LPTEIGQLVNLKKLGLSENALTS-LPDSLASLESLETLDLRHNKLT-EVPSVIYKIGSLETLWLRYNRIVA-VDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLS-ELPYSIGKLVNLVRIGIRYNKIR-CIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVS-LPLDMGSWTSITELNLSTNQLK 388
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: SHOC2_CAEBR (Leucine-rich repeat protein soc-2 OS=Caenorhabditis briggsae GN=soc-2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 76/267 (28.46%), Postives = 128/267 (47.94%), Query Frame = 1 Query: 7 IPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSG-----------------------EIPRLLYWNEV-LQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQ-IATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGPIPD 732 IP + +QLE I+++N L P+ L+ LP + ++L+ N+L+ +IP ++ L L L+ N LV +L DM + + ++ N L +P++I + ++L LS NQL ++P IG L+ + L L+ N+L +P+ IG +Q L L + N + +P +GNL + L L N LT IP E+G++ L L LNDN ++P L L +++ N+ L P+ Sbjct: 272 IPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVPTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELV-SLPLDMGSWTSITELNLSTNQLK-VLPEDIEKLVNLEILVLSNNQLK-KLPNQIGNLKKLRELDLEENELE-TVPTEIGFLQHLTKLWVQSNKIV-TLPRSIGNLCSLQDLRLGENNLTA-IPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPE 532 HSP 2 Score: 76.2554 bits (186), Expect = 2.314e-13 Identity = 82/307 (26.71%), Postives = 135/307 (43.97%), Query Frame = 1 Query: 7 IPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTG----------------------SIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFL------------------------QIATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLS-----GP---IPPILGNLSYTE----------------KLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLE 717 +P I +L L+ L L N L +P +LS L +L+ LDL NKL+ E+P ++Y L+ L LR N +V + + L L DVR N + +P+ IG C + LDL +N LS E+P++IG L Q+ ++ N L P+++ ++ + ++LS N L+ GP +P + N+ + + KL L N+L +P ++G+ T + L L+ NQL +P + KL +L L ++NN L+ Sbjct: 111 LPTEIGQLVNLKKLGLSENAL-SSLPDSLSSLESLETLDLRHNKLT-EVPAVIYKITSLETLWLRYNRIVA-VDEQIGNLQKLKMLDVRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQLDLQHNDLS-ELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVPTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVS-LPLDMGSWTSITELNLSTNQLK-VLPEDIEKLVNLEILVLSNNQLK 411
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: SCRIB_MOUSE (Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 76/262 (29.01%), Postives = 118/262 (45.04%), Query Frame = 1 Query: 7 IPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPD----MCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQIATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGH----------------------IPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHL 714 +P ++L+ L L L N+ + +P + L NL L+L N L +P L + L+ L L GN+L + PD + L LW + N L+ ++P +GN LD+S N+L E+P +G L + T L L ++P IG ++ L++L + N L + +G+ +L L N LT +PPE+G L L L DN+L +PP L +L L+VA N L Sbjct: 120 LPDGFTQLRSLAHLAL-NDVSLQALPGDVGNLANLVTLELRENLLKS-LPASLSFLVKLEQLDLGGNDL--EVLPDTLGALPNLRELW---LDRNQLS-ALPPELGNLRRLVCLDVSENRLE-ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLC-EVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRL-AVLPPELAHTAELHVLDVAGNRL 370
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: YG015_MACFA (Leucine-rich repeat and death domain-containing protein LOC401387 homolog OS=Macaca fascicularis GN=QtsA-18164 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.039e-13 Identity = 77/246 (31.30%), Postives = 119/246 (48.37%), Query Frame = 1 Query: 4 DIPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQIATL------SLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGP 723 +IP IS KQL L L N+L+ L NLK LDL N++ +IP + N + ++ + N T ++C L L D+ N L I +I N Q L+ S NQ I F I Q+ +L ++G +LT ++P + M L LD+S N + IP +G L L+ ++N+++ +IPP L ++ L L L+ N LT +P A+ L L ++N +N L P Sbjct: 504 EIPADISFSKQLLHLELSENKLL-IFSEHFCSLINLKYLDLGKNQIK-KIPASIS-NMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQ-KISSDICNLKRIQKLNFSSNQF---IHFPIELCQLQSLEQLNISQIKGRKLT-RLPGELSNMTQLKELDISNNAIR-EIPRNIGELRNLVSLHAYNNQIS-YIPPSLLSLNDLQQLNLSGNNLTA-LPSAIYNLFSLKEINFDDNPLLRP 738
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.039e-13 Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 238 CQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQIATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGPIP 729 C+ S + D+ + ++G++ + + S + LD+S N + +P+ + + +L+L N L+G +P I M +L+ +++S N L+ I I + L L N +G +P L ++ L L + +NQLTG I G L LNVANNH G IP Sbjct: 70 CEGSAVVTIDISDLGVSGTLGYLLSDLKSLRKLDVSGNSIHDTLPYQLP-PNLTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNFSGDLPSSLSTVSTLSVLYVQNNQLTGSIDVLSG--LPLKTLNVANNHFNGSIP 230 HSP 2 Score: 74.3294 bits (181), Expect = 8.793e-13 Identity = 47/156 (30.13%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 1 GDIPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQIATLSLQGNQLTGKIPSVIGLMQAL 468 G + + +S LK L L + N + +P L PNL L+LA N LSG +P + L Y+ + GN+L ++ L D+ +N+ +G +P ++ ++ VL + NQL+G I G L + TL++ N G IP + +Q L Sbjct: 87 GTLGYLLSDLKSLRKLDVSGNSIHDTLPYQLP--PNLTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNFSGDLPSSLSTVSTLSVLYVQNNQLTGSIDVLSG-LPLKTLNVANNHFNGSIPKELSSIQTL 239
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: LRC40_XENLA (Leucine-rich repeat-containing protein 40 OS=Xenopus laevis GN=lrrc40 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.039e-13 Identity = 72/225 (32.00%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 46 LILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQ-IATLSLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLE 717 LIL +N+L + +S LP L VLD+ N+++ +P + LQ L + +N + L ++ L L F +++N L +P +IG+ + + LD+S N L + ++G L + +L N+LT +P+ IG M+ L LD + N+L +P + + E+LYL NKLT PEL +TKL L + +NQ+ P L L+ L L + N L+ Sbjct: 87 LILASNKLQA-LSEDISLLPALVVLDIHDNQIAS-LPCAIRELTNLQKLNI-SHNKIKQLPNELQHLQNLKSFLLQHNQLE-ELPDSIGHLSILEELDVSNNCLRS-VSSSVGQLTGLVKFNLSSNKLTA-LPTEIGKMKNLRQLDCTSNLLEN-VPASVAGMESLEQLYLRQNKLT--YLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLK 302
BLAST of CX043849 vs. ExPASy Swiss-Prot
Match: YG015_HUMAN (Leucine-rich repeat and death domain-containing protein LOC401387 OS=Homo sapiens PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.357e-13 Identity = 75/246 (30.49%), Postives = 119/246 (48.37%), Query Frame = 1 Query: 4 DIPFSISKLKQLEFLILKNNQLIGPIPSTLSQLPNLKVLDLALNKLSGEIPRLLYWNEVLQYLGLRGNNLVGTLSPDMCQLSGLWYFDVRNNSLTGSIPQNIGNCTSFQVLDLSYNQLSGEIPFNIGFLQIATL------SLQGNQLTGKIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLSYTEKLYLHSNKLTGHIPPELGNMTKLHYLELNDNQLTGHIPPALGKLTDLFDLNVANNHLEGP 723 +IP IS KQL L L N+L+ L NLK LDL N++ +IP + N + ++ + N T ++C L L D+ N L I +I N Q L+ S NQ I F I Q+ +L ++G +LT ++P + M L LD+S N + IP +G L L+ ++N+++ ++PP L ++ L L L+ N LT +P A+ + L ++N +N L P Sbjct: 501 EIPVDISFSKQLLHLELSENKLL-IFSEHFCSLINLKYLDLGKNQIK-KIPASIS-NMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQ-KISSDICNLKGIQKLNFSSNQF---IHFPIELCQLQSLEQLNISQIKGRKLT-RLPGELSNMTQLKELDISNNAIR-EIPRNIGELRNLVSLHAYNNQIS-YLPPSLLSLNDLQQLNLSGNNLTA-LPSAIYNIFSLKEINFDDNPLLRP 735 The following BLAST results are available for this feature:
BLAST of CX043849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043849 ID=CX043849; Name=CX043849; organism=Citrus sinensis; type=EST; length=809bpback to top |