DC900401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.908e-32 Identity = 64/113 (56.64%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 363 TLY +S RQFY C I GTVDFIFG AAAVFQ C I AR+P Q N++TAQ R++ +G QKC I A+SDL +KG+ +T+LGRPW+ +SR V M+S I DVI+ AGW Sbjct: 174 TLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.123e-31 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGE 381 TLYV++ RQFY + +++GTVDFI G +A V QN I R+ +P Q N VTA G+ GIV+ CRI A +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW GE Sbjct: 390 TLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGE 509 HSP 2 Score: 45.8246 bits (107), Expect = 1.123e-31 Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 T Y E+ N G GA+ + RV W+ K+ SAAE + +T AN++ + W+ LGL Sbjct: 514 TATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.963e-28 Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI-----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLL----AVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLY HSLRQFY C I G VDFIFGN+AAVFQ+CDI H++ N +TA GR D +Q+TG V C I T + + A + +LGRPWK +SRTV + ++ +I+P GW W+G+F + Sbjct: 421 TLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFAL 551
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.376e-23 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 TLY H R +Y C I G+VDFIFGNA ++++ C +HA ++ VTAQGR ++TG KC++ T L YLGR W +SR V + + ++I P GWY W Sbjct: 225 TLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNW 328 HSP 2 Score: 40.0466 bits (92), Expect = 3.376e-23 Identity = 20/49 (40.82%), Postives = 31/49 (63.27%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 541 T+FY +Y+ TGAGA+ RV W+ + +T EA+ + + FI GS W+ Sbjct: 336 TVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.281e-21 Identity = 50/128 (39.06%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCIGHI 399 TLY R +Y C+I+G +DFIFG A ++F+ C + R P +TAQGRD P G V + C V GS + LGR WK YSR + +S SD I P GW W + GHI Sbjct: 170 TLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC---------TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHI 288 HSP 2 Score: 32.7278 bits (73), Expect = 2.281e-21 Identity = 19/53 (35.85%), Postives = 23/53 (43.40%), Query Frame = 2 Query: 404 YAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 562 + E+ TG GADTS RV W T S + +T FI WL F Sbjct: 290 FVEFGCTGVGADTSKRVPWLT---KASEKDVLQFTNLTFIDEEGWLSRLPIKF 339
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.957e-20 Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 TL + ++ +C I G DFI G+A+++++ C +H+ PN +TAQ R + +G C++ GS T+LGRPW YSR V S S+V+ P GW +W Sbjct: 176 TLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPN---NGSITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279 HSP 2 Score: 40.4318 bits (93), Expect = 6.957e-20 Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 2 Query: 392 DTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 541 +T++Y EY+ G GAD RV+WS S EA + + +FI G WL Sbjct: 286 NTVYYGEYKCYGPGADREQRVEWSK---QLSDEEATVFLSKDFIGGKDWL 332
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.175e-19 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 16 TKXTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 ++ TL+ + ++ C I G VDFIFGNA +++Q+CDIH+ + + A RD ++TG C I T + YLGR W YSRTV I+D+I P GW +W Sbjct: 219 SQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDW 325 HSP 2 Score: 31.187 bits (69), Expect = 1.175e-19 Identity = 17/48 (35.42%), Postives = 23/48 (47.92%), Query Frame = 2 Query: 398 LFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 541 + + EY G GA+ RV WS K +T E + + FI G WL Sbjct: 334 VMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.326e-17 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI--HARRPNPNQR---NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 363 TL+ R ++ C I G++DFIFGNA +++Q+C I A + +P + VTA GR ++N+G C IG T +LGR W+ YSR V + + ++DVI P GW Sbjct: 224 TLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTG---------HVWLGRAWRPYSRVVFVSTTMTDVIAPEGW 332 HSP 2 Score: 31.187 bits (69), Expect = 1.326e-17 Identity = 19/51 (37.25%), Postives = 23/51 (45.10%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAAN--FIAGSTWL 541 T+FY EY +G GAD S R + + E Q N FI G WL Sbjct: 343 TIFYGEYNCSGPGADMSKRAPY-----VQKLNETQVALLINTSFIDGDQWL 388
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.965e-17 Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 46 RQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQR---NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 R + +C I G +DFIFG+ +V+++C I+A + +TAQGR + +G V + +V GS YLGR + +SR + +Q+D+S V++P GWY W Sbjct: 131 RHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRG---------SVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSW 233 HSP 2 Score: 32.7278 bits (73), Expect = 4.965e-17 Identity = 17/48 (35.42%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 404 YAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGS 547 YAE + GAG+D S RV W + S Q ++ +NFI W+ + Sbjct: 244 YAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.480e-16 Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCIGHIVLCRVSKHRCW 432 TL+ R ++ C I G VDFI G+ +++Q+C I + P +TAQGR + N G V C V G + YLGR W+ YSR + S+++DV++P GW+EW+ + G+ ++H C+ Sbjct: 162 TLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQ---GYEKQLTYAEHGCF 287 The following BLAST results are available for this feature:
BLAST of DC900401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900401 ID=DC900401; Name=DC900401; organism=Citrus sinensis; type=EST; length=576bpback to top |