DC900401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16 Identity = 45/138 (32.61%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCIGHIVLCRVSKHRCW 432 TL+ R ++ C I G VDFIFG +++Q+C I + P +TAQGR +P G + C V G+ +LGRPW+ YSR + S+++DV+ P GW W+ +GH ++H C+ Sbjct: 167 TLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWN---FVGHENQLVFAEHGCF 292
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.498e-15 Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 TLY+H +Q+ C I G+VDFIFGN+ A+ ++C IH + + +TAQ R ++TG V +C I S YLGRPW + R V+ + + I GW+ W Sbjct: 145 TLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNW 249 HSP 2 Score: 22.3274 bits (46), Expect = 1.498e-15 Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 2 Query: 404 YAEYQNTGAGADTSNRVKWS 463 + EY+ G G+ +S RV WS Sbjct: 260 FYEYRCFGPGSCSSERVPWS 279
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.280e-15 Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 375 TL+ + R +Y C I G++DFIFG A ++F NC+I +R P +TA R+ + TG V + + V G E YLGR YSR + ++ +S + P GW WS Sbjct: 176 TLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKP--YGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWS 284 HSP 2 Score: 32.3426 bits (72), Expect = 3.280e-15 Identity = 16/48 (33.33%), Postives = 29/48 (60.42%), Query Frame = 2 Query: 398 LFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 541 L++ EY+ G GA+ R W+ K +T E +++ + +FI G++WL Sbjct: 292 LYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.216e-14 Identity = 39/119 (32.77%), Postives = 56/119 (47.06%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 TL+ R +Y CII+G +DFIFG ++F+ C ++ N +TA R P+ G V C V G +T LGR W +R + +S +SDV+ P GW W Sbjct: 165 TLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAW 274 HSP 2 Score: 32.3426 bits (72), Expect = 1.216e-14 Identity = 22/58 (37.93%), Postives = 30/58 (51.72%), Query Frame = 2 Query: 398 LFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLG 571 L + E TGAGADTS RV W K + S +E + + +FI W+ + FP G Sbjct: 283 LTFVEAGCTGAGADTSQRVPW--LKKL-SLSEVDGFASVSFIDQDGWI--SRFPIEGG 335
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.494e-14 Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 375 TL + Q Y + I G VDFIFG +A A FQN DI P + +TA GR + VI K + A +G++ YLGRPW Y+R V Q+ +++VIN GW EWS Sbjct: 163 TLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWS 276
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.581e-14 Identity = 34/106 (32.08%), Postives = 54/106 (50.94%), Query Frame = 1 Query: 52 FYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 369 F+ C I GT DFIFG A+++ N +HA + ++TAQGR + G C++ T + YLGR W + + V ++++ V+NP+GW E Sbjct: 207 FFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRE 301 HSP 2 Score: 30.0314 bits (66), Expect = 7.581e-14 Identity = 16/49 (32.65%), Postives = 23/49 (46.94%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 541 T+FY EY+ G G+ RV ++ E + +I GSTWL Sbjct: 310 TVFYGEYKCFGPGSHLEKRVPYTQ---DIDKNEVTPFLTLGYIKGSTWL 355
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14 Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 375 TL + Q Y I G VDFIFG +A A F CDI P+ + +TA GR + ++ VI K + A G++ YLGRPW +Y+R ++ ++DVIN GW EWS Sbjct: 162 TLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWS 275
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.616e-13 Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 46 RQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 R F+ C I G++DFIFGN +++Q+C I+ A+ +TAQGR ++ +G C+I GS E LGR W Y+ V + +S +I P GW W Sbjct: 231 RHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 332
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.142e-13 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 363 TL R F+ C I G++DFIFGN +++++C +H+ N +TA G+D TG V C+I GS +LGR W+ Y+R + ++ +S V++ GW Sbjct: 175 TLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGW 277
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 55.4546 bits (132), Expect = 8.397e-12 Identity = 29/106 (27.36%), Postives = 49/106 (46.23%), Query Frame = 1 Query: 52 FYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 369 F+ C I GT DFIFG+ +++ ++ ++TA + +G C++ T + YLGR W + + V +D+S V+NP+GW E Sbjct: 184 FFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIR---VITAHAGKSAAEKSGYSFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAYTDMSSVVNPSGWQE 278 HSP 2 Score: 36.1946 bits (82), Expect = 8.397e-12 Identity = 18/49 (36.73%), Postives = 28/49 (57.14%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 541 T+FY EY+ TG G+ RVK++ EA+ + + +I GS+WL Sbjct: 287 TVFYGEYKCTGTGSHKEKRVKYTQ---DIDDIEAKYFISLGYIQGSSWL 332 The following BLAST results are available for this feature:
BLAST of DC900401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900401 ID=DC900401; Name=DC900401; organism=Citrus sinensis; type=EST; length=576bpback to top |