DC900399

Overview
NameDC900399
Unique NameDC900399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length998
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:125..1116. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.285e-27
Identity = 82/235 (34.89%), Postives = 126/235 (53.62%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK--DHAWG*PLDLSGLDPFIGAALAAVYH 777
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+T  LL+  ++SL RA FY+  Q +GA+ GAG++ G         L    N + +  T+G  +  E+I TF L   +F++TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+     W     +  + P +GA LAA+ +
Sbjct:    4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNL--AVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHW-----VFWVGPIVGAVLAAILY 221          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 119.398 bits (298), Expect = 3.300e-26
Identity = 77/234 (32.91%), Postives = 122/234 (52.14%), Query Frame = 1
Query:   97 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIVIR 792
            + +R  +AEF+ TF  + I + +  G +  +   +      IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GA+ GA V+K    S   E +GG G   +A G + G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G A++  N    W     +  + P +G  +A   +++  +
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS---EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGNYTDLW-----VYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.300e-26
Identity = 86/237 (36.29%), Postives = 123/237 (51.90%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK-DHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V L HL  I  TG  +NPARSL  AI+  K D  W     +  + P +GA +A++ +  V+
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHW-----VFWIGPLVGAIVASLLYNYVL 223          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 7.351e-26
Identity = 76/234 (32.48%), Postives = 119/234 (50.85%), Query Frame = 1
Query:   97 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIVIR 792
            + +R  +AEF+ TF  + I + + MG         T     IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GA+ GA ++K    S   + +GG G   +    T G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS G A++  N    W     +  + P +G  LA   +++  +
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS---DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQW-----VYWVGPIVGGILAGAVYRLFFK 238          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.638e-25
Identity = 84/237 (35.44%), Postives = 121/237 (51.05%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK-DHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            EL+S +F RA  AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S+ RA FY+  Q LGAV GA ++     +     L    N +++  T G  +  E+  T  LV  +F++TD +R       P    L IGF+V L HL  I  TG  +NPARSL  A++  K D  W     +  + P +GA L ++ +  V+
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDL--AVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHW-----VFWIGPLVGAILGSLLYNYVL 223          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.793e-25
Identity = 85/237 (35.86%), Postives = 122/237 (51.48%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK-DHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  AI+  K D  W     +  + P +GA +A++ +  V+
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHW-----VFWIGPLVGAIVASLLYNYVL 223          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.061e-24
Identity = 80/237 (33.76%), Postives = 117/237 (49.37%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            E +S+SF+RA  AEF  T  +++      +G S          +  IA AFG ++  +V     +SG HINPAVTF  L+  ++SL RA+FY+  Q LGAV GA V+ G   +     L    N +  G + G     EI  T   V  +F+  D +RN R   V     L IGF++ L HL  +  TG  +NPARS   A++  N  + W     +  + P IG AL  + +  ++
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFG----LGASLK-WAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNL--ALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRNFTNHW-----VYWVGPIIGGALGGLVYDFIL 223          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24
Identity = 82/237 (34.60%), Postives = 131/237 (55.27%), Query Frame = 1
Query:  106 RAGIAEFMATFLFLYITVLTVMGVSK------SNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII-FNKDHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            RA +AEF++TF+F++    +++ + K      ++T  +T G +  +A A    +FA V     +SGGH+NPAVTF  L+  ++S+ RA++Y V Q +GA+    +++    +     +G     VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V    L   P  G  +NPAR+ G A++ +   + W     +  + PFIG ALAA+ ++ +I
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLR--LATNGLRPVGFH---VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHW-----IYWVGPFIGGALAALIYEYMI 246          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.088e-24
Identity = 83/248 (33.47%), Postives = 125/248 (50.40%), Query Frame = 1
Query:   79 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK-DHAWG*PLDLSGLDPFIGAALAA-VYHQIVIRA 795
            G+  S +  +A +AEF+AT LF++  V + +  +K  S+      G+  +A A    +F  V   A +SGGH+NPAVT GL +   +++   +FY + QCLG+     ++K          +  G +V  HG   G     G+  EII TF LVYTV+ +A D K+ +    + ++AP+ IGF V    LA  P +G  +NPARS G A+        W     +    P IG ALA  +Y  + I A
Sbjct:   10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK---------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNW-----IYWAGPLIGGALAGFIYGDVFITA 239          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 3.088e-24
Identity = 83/232 (35.78%), Postives = 119/232 (51.29%), Query Frame = 1
Query:  106 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWG*PLDLSG-----LDPFIGAALAAVYH 777
            RA +AEF++T LF++  V + +  +K  S+    T G+  IA   G  +F  V   A ISGGH+NPAVTFGL +  ++++   VFY + Q LG+     ++K   G      L    + VA G    +G+  EII TF LVYTV+ +A D K+ +    +  +APL IG  V    LA  P +G  +NPARS G A+            D SG     + P IG  LA + +
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAG---------DFSGHWVYWVGPLIGGGLAGLIY 232          
The following BLAST results are available for this feature:
BLAST of DC900399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
AQP5_HUMAN2.285e-2734.89Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP_ANOGA3.300e-2632.91Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP2_SHEEP3.300e-2636.29Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP_AEDAE7.351e-2632.48Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP2_HUMAN1.638e-2535.44Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP2_BOVIN2.793e-2535.86Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
MIP_RANPI1.061e-2433.76Lens fiber major intrinsic protein OS=Rana pipiens... [more]
TIP32_ARATH2.365e-2434.60Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP_ANTMA3.088e-2433.47Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP21_ARATH3.088e-2435.78Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]

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Properties
Property NameValue
Genbank descriptionDC900399 VSS Citrus sinensis cDNA clone VS28973 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900399 ID=DC900399; Name=DC900399; organism=Citrus sinensis; type=EST; length=998bp
GAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGA
GCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTT
TTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTAC
ATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTC
CACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTG
CGCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCA
GTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGGGCTGT
CTTCTACATGGTCATGCAGTGCCTTGGTGCTGTCTGTGGTGCTGGTGTTG
TCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAGCC
AATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAGAT
TATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGCGA
AGAGAAACGCCAGAGACTCTCATGTCCCTATTTTGGCCCCCCTCCCCATT
GGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCACAGGAAC
TGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTCAACAAAG
ACCATGCCTGGGGATGACCATTGGATCTTTCTGGGTTGGACCCATTCATT
GGAGCTGCACTGGCTGCTGTGTACCACCAGATAGTCATCAGGGCCATTCC
CTTCAAGTCCAGGGCTTAAAAAAGTTCACTGATGGANCNTTTTTTTTTTT
AATTTGGATCTTCTTTGTCGGGTCTTTTTGTTTATGNGCATTTGGTGTTT
AACTGTTTAAAATGTTAATTAATTGTGTGTAAATTATCTAGCATTGCTGA
ATTTTTTTTTTTTTAAGCTTTTGATTGGAGGATTCATTTTTTAGTCTT
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