DC900399

Overview
NameDC900399
Unique NameDC900399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length998
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:125..1116. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.607e-23
Identity = 69/194 (35.57%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  205 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWG*PLDLSGLDPFIGAALAAV 771
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+    D A    L L  + P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALF--ADRAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.298e-22
Identity = 78/233 (33.48%), Postives = 122/233 (52.36%), Query Frame = 1
Query:  106 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG--SKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIV 786
            +A +AEF++T +F++  V + +  +K          G+  +A   G  +F  V   A ISGGH+NPAVTFGL L  ++++   VFY + Q LGA+ GA +V+   G  +  +   G GA          +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G A+   +  + W     +  + P +G  LA + ++ V
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIW-----IYWVGPLVGGGLAGLVYRYV 234          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.695e-22
Identity = 78/235 (33.19%), Postives = 118/235 (50.21%), Query Frame = 1
Query:  106 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII-FNKDHAWG*PLDLSGLDPFIGAALAAVYHQIVIRAIP 801
            RA ++EF+AT +F++    +V G+ K      T+G +  +A A    + A V  +   SGGH+NPAVTFG+L+ R++S  RA  Y   Q LGAV    +++   G      +      + H   +   L  E++ TF LVYTV+ +A D +    D     +APL IG       LA  P  G  +NPAR+ G A++ +N  H W     +  L P IGA +A   ++ V+   P
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGG-----MRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD-----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHW-----VYWLGPLIGAGMAGALYEFVMAEQP 248          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.213e-22
Identity = 69/194 (35.57%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  205 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWG*PLDLSGLDPFIGAALAAV 771
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+    D A    L L  + P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVALF--ADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.891e-22
Identity = 81/238 (34.03%), Postives = 120/238 (50.42%), Query Frame = 1
Query:   70 FEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII---FNKDHA-WG*PLDLSGLDPFI 750
            F  G LK++      +AEF+AT LF++  V + +  +K  ++      G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++   F+++   W  PL   GL  FI
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFI 231          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.891e-22
Identity = 81/238 (34.03%), Postives = 120/238 (50.42%), Query Frame = 1
Query:   70 FEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII---FNKDHA-WG*PLDLSGLDPFI 750
            F  G LK++      +AEF+AT LF++  V + +  +K  ++      G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++   F+++   W  PL   GL  FI
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFI 231          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.775e-22
Identity = 78/237 (32.91%), Postives = 115/237 (48.52%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            EL+S SF+RA  AEF AT  +++  +      S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +    + G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG G+NPARS   AI+  N  + W     +  + P IG  L ++ +  ++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHW-----VYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.775e-22
Identity = 71/200 (35.50%), Postives = 105/200 (52.50%), Query Frame = 1
Query:  205 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAH----GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWG*PLDLSGLDPFIGAALAAVYHQIV 786
            +G+ G+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++ Q  GA+  A V+      K   +LGG  AN        GY+    L  E++ T   +  +  +T        S VP+  AP+ IG  + L+HL +IP+T T +NPARS G A +F  D A    L L  + P IGA +A +  +IV
Sbjct:   34 IGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAIS-QLWLFWVAPLIGAVIAGIVWKIV 224          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.930e-22
Identity = 80/237 (33.76%), Postives = 116/237 (48.95%), Query Frame = 1
Query:   82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789
            EL+S SF+RA  AEF AT  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +  G +       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+  N  + W     +  + P IG  L ++ +  ++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHW-----VYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.930e-22
Identity = 74/200 (37.00%), Postives = 100/200 (50.00%), Query Frame = 1
Query:  205 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAH----GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWG-*PLDLSGLDPFIGAALAAVYHQI 783
            +G  G+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y+V Q LGAV  A  +      K    +GG  AN        GY+    L  EII T   +  +  +T  +       VP+  AP+ IG A+ L+HL +IP+T T +NPARS G A+       W    L L  L P +G A+ AV  +I
Sbjct:   34 IGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG---GWALQQLWLFWLAPILGGAIGAVVWKI 223          
The following BLAST results are available for this feature:
BLAST of DC900399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
AQPZ_BRUA27.607e-2335.57Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIP22_ORYSJ1.298e-2233.48Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP32_ORYSJ1.695e-2233.19Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPZ_BRUME2.213e-2235.57Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
TIP2_TOBAC2.891e-2234.03Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC2.891e-2234.03Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
MIP_HUMAN3.775e-2232.91Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQPZ1_RHIME3.775e-2235.50Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
MIP_CAVPO4.930e-2233.76Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQPZ1_AGRT54.930e-2237.00Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]

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Properties
Property NameValue
Genbank descriptionDC900399 VSS Citrus sinensis cDNA clone VS28973 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900399 ID=DC900399; Name=DC900399; organism=Citrus sinensis; type=EST; length=998bp
GAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGA
GCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTT
TTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTAC
ATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTC
CACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTG
CGCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCA
GTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGGGCTGT
CTTCTACATGGTCATGCAGTGCCTTGGTGCTGTCTGTGGTGCTGGTGTTG
TCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAGCC
AATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAGAT
TATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGCGA
AGAGAAACGCCAGAGACTCTCATGTCCCTATTTTGGCCCCCCTCCCCATT
GGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCACAGGAAC
TGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTCAACAAAG
ACCATGCCTGGGGATGACCATTGGATCTTTCTGGGTTGGACCCATTCATT
GGAGCTGCACTGGCTGCTGTGTACCACCAGATAGTCATCAGGGCCATTCC
CTTCAAGTCCAGGGCTTAAAAAAGTTCACTGATGGANCNTTTTTTTTTTT
AATTTGGATCTTCTTTGTCGGGTCTTTTTGTTTATGNGCATTTGGTGTTT
AACTGTTTAAAATGTTAATTAATTGTGTGTAAATTATCTAGCATTGCTGA
ATTTTTTTTTTTTTAAGCTTTTGATTGGAGGATTCATTTTTTAGTCTT
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