DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK12_MOUSE (Mitogen-activated protein kinase 12 OS=Mus musculus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29
Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+ +L+ + H NVI L  + T   S       YLV  +M  DL  L+    +  +E +++  ++Q+L GL++ H  GV+HRD+K  NL +++D  LKI DFGLA   D      MT  VVT WYR PE++L    Y   VD+WS GCI+AE++ GK +  G   ++QL +I K+ G+P  E
Sbjct:   53 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDESLDDFTDFYLVMPFMGTDLGKLMKHETL--SEDRIQFLVYQMLKGLKYIHAAGVIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKILFKGNDHLDQLKEIMKITGTPPPE 248          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPKC_ASPFU (Mitogen-activated protein kinase mpkC OS=Aspergillus fumigatus GN=mpkC PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 76/199 (38.19%), Postives = 116/199 (58.29%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEV--KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            VALKK+          K   REI +L+ L H N+I +  +  S +   +Y+    +  DL  L++   +  KF++     +++Q+L GL++ H+  V+HRD+K +N+LI+++  LKI DFGLA   +P     MT  V T +YR  E++L    YGV VD+WSAGCILAE+L  KP+ PG+  V Q H I  + G+P +
Sbjct:   46 VALKKIMKPFDSSSLAKRTYREIRLLKYLRHENLICMRDIFISPLE-DIYIATELLGTDLGRLLSIKPLDSKFSQ----YFIYQILRGLKYIHSANVIHRDLKPTNILINENCDLKICDFGLARLQEPQ----MTGYVATRYYRAQEIMLTWQRYGVQVDVWSAGCILAEMLRRKPLFPGKDHVHQFHLITNILGNPPD 235          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK16_ARATH (Mitogen-activated protein kinase 16 OS=Arabidopsis thaliana GN=MPK16 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 77/204 (37.75%), Postives = 114/204 (55.88%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+            + REI +LR L HP++++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++QLL GL++ H   V HRD+K  N+L + D  LKI DFGLA  +F D       T  V T WYR PEL     + Y   +D+WS GCI AELL GKP+ PG+  V QL  +  + G+PS E
Sbjct:   51 VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDMLGTPSAE 253          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK12_ORYSJ (Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 78/204 (38.24%), Postives = 113/204 (55.39%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+            + REI +LR L HP++++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++QLL  L++ H   V HRD+K  N+L + D  LKI DFGLA  SF D       T  V T WYR PEL     + Y   +D+WS GCI AELL G+P+ PG+  V QL  I  L G+PS E
Sbjct:  113 VAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFQDIYVVFELMESDLHQVIRAND-DLTPEHYQFFLYQLLRALKYIHAANVFHRDLKPKNILANSDCKLKICDFGLARASFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGRPLFPGKNVVHQLDIITDLLGTPSSE 315          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK15_RAT (Mitogen-activated protein kinase 15 OS=Rattus norvegicus GN=Mapk15 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPES-VKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP----MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+KK+ FD    ++  +   REI++LR    HPN+I+L  ++ ++    +YLVF  M+ DL  ++    +   +   +C  +QLL   +  H+  V+HRD K +N+L+D    +K+ DFGLA       + P    +T  V T WYR PE+LL +  Y  GVD+WS GCIL E+L G+P+ PG +   QL  I +    PS E
Sbjct:   38 EVVAIKKI-FDAFRDQTDAQRTFREIMLLREFGGHPNIIRLLDVIPAKNDRDIYLVFESMDTDLNAVIQKGRL-LEDIHKRCIFYQLLRATKFIHSGRVIHRDQKPANVLLDAACRVKLCDFGLARSLSDFPEGPGGQALTEYVATRWYRAPEVLLSSRWYTPGVDMWSLGCILGEMLRGQPLFPGTSTFHQLELILETIPLPSME 241          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29
Identity = 80/208 (38.46%), Postives = 119/208 (57.21%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLVAS-PEVKFTEPQ--VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+KKV  D       +F  RE+ I+R+L H N+I L+    S    R    L LV  ++   L  +       K T P   V+ YM+QLL  + + H+ G  HRDIK  N+L+D + GVLK+ DFG A         P  S + + +YR PEL+ G+TDY   +D+WSAGC+++ELL G+ I PG + V+Q+ +I K+ G+P+ E
Sbjct:   57 EMVAIKKVLQDR------RFKNRELQIMRKLRHDNIITLKWFFFSSGEKRDEVYLNLVMEFLPETLYKVERQYARAKQTLPVNFVRLYMYQLLRSMGYLHSLGFCHRDIKPQNMLLDSETGVLKLCDFGSAKQLISGE--PNVSYICSRYYRAPELIFGSTDYTTKIDMWSAGCVMSELLLGQLIFPGDSGVDQIVEIVKVMGTPTSE 256          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK14A_DROME (Mitogen-activated protein kinase 14A OS=Drosophila melanogaster GN=Mpk2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29
Identity = 72/205 (35.12%), Postives = 115/205 (56.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS-------LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+ +L+ +DH NVI L  +     +         +YLV H M+ DL  ++    +  ++  V+  ++Q+L GL++ H+ GV+HRD+K SN+ +++D  L+I DFGLA       ++ MT  V T WYR PE++L    Y   VD+WS GCI+AEL+  + + PG   + QL+ I ++ G+P  E
Sbjct:   51 VAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHL--SDDHVQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLAR----PTENEMTGYVATRWYRAPEIMLNWMHYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAE 249          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_ASPOR (Serine/threonine-protein kinase SSN3 OS=Aspergillus oryzae GN=ssn3 PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29
Identity = 78/220 (35.45%), Postives = 120/220 (54.55%), Query Frame = 2
Query:   11 ALKKVRFDNLEPESVKFMA------REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV----ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS-FFDP-NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-----------EVEQLHKIYKLCGSPSEE 601
            A+KK + D  E E +++        RE+ +   LDH NV++LE ++    +  +++VF Y EHDL  ++             P V+  + QLL+GL + H + VLHRD+K +N+L+   G ++I D GLA  F+ P N        VVT+WYR PELL+G+  Y   VDLW+ GCI AELL+ +PI  G             +  Q+ KI ++ G P+++
Sbjct:   54 AIKKFKPDK-EGEIIQYTGLSQSAIREMALCSELDHANVVQLEEIILEDKA--IFMVFEYTEHDLLQIIHHHTQPHRHAIPAPMVRSILFQLLNGLLYLHTSWVLHRDLKPANILVTSSGAIRIGDLGLARLFYKPLNSLFSGDKVVVTIWYRAPELLMGSRHYTPAVDLWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMMKIIEIMGLPTKD 270          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29
Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVA---SPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  Y+   ++ ++        +     VK Y +Q+   L + HN+ GV HRDIK  NLL++     LKI DFG A         P  S + + +YR PEL+ GAT+Y   +D+WSAGC+L ELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:  100 VAIKKVLQDK------RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNKMNQRMPMIYVKLYSYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 297          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSJ (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29
Identity = 79/206 (38.35%), Postives = 120/206 (58.25%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+   F+++  ++++ + REI +LR L HP+++ ++ ++   T R    +Y+VF  ME DL  ++ +      E   + +++QLL  L++ H+  V HRD+K  N+L + D  LKI DFGLA  +F D       T  V T WYR PEL     + Y   +D+WS GCI AE+L G+P+ PGR  V QL  I  L G+PS E
Sbjct:   39 VAIKKINDVFEHVS-DAIRIL-REIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEANHDLSPEHH-RFFLYQLLCALKYIHSANVFHRDLKPKNILANSDCKLKICDFGLARVAFNDSPSTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEILTGRPLFPGRNVVHQLDLITDLLGTPSSE 241          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK12_MOUSE3.015e-2938.12Mitogen-activated protein kinase 12 OS=Mus musculu... [more]
MPKC_ASPFU3.938e-2938.19Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MPK16_ARATH3.938e-2937.75Mitogen-activated protein kinase 16 OS=Arabidopsis... [more]
MPK12_ORYSJ3.938e-2938.24Mitogen-activated protein kinase 12 OS=Oryza sativ... [more]
MK15_RAT3.938e-2936.41Mitogen-activated protein kinase 15 OS=Rattus norv... [more]
GSK3H_DROME3.938e-2938.46Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
MK14A_DROME5.144e-2935.12Mitogen-activated protein kinase 14A OS=Drosophila... [more]
SSN3_ASPOR6.718e-2935.45Serine/threonine-protein kinase SSN3 OS=Aspergillu... [more]
MSK3_MEDSA6.718e-2937.86Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
MPK13_ORYSJ6.718e-2938.35Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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