DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_MAGGR (Mitogen-activated protein kinase HOG1 OS=Magnaporthe grisea GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.002e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAIKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.002e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAIKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL1_RAT (Cyclin-dependent kinase-like 1 OS=Rattus norvegicus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.002e-32
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG 586
            +IVA+K+      +P   K   REI +L++L HPN++ L  L   R    L+LVF Y  H +   +   +    EP VK    Q L  +  CH +  +HRD+K  N+LI    V+K+ DFG A        +  T  V T WYR PELL+G T YG  VD+W+ GC+ AELL+G P+ PG+++V+QL+ I K  G
Sbjct:   28 QIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVSL--LEVFRRKRRLHLVFEYCHHTVLHELDRYQRGVPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPGDY-YTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 219          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK13_PANTR (Mitogen-activated protein kinase 13 OS=Pan troglodytes GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+L+L+ + H NVI L  + T   S       YLV  +M+ DL  ++    ++F+E +++  ++Q+L GL++ H+ GV+HRD+K  NL +++D  LKI DFGLA   D      MT  VVT WYR PE++L    Y   VD+WS GCI+AE+L GK +  G+  ++QL +I K+ G P  E
Sbjct:   51 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFHDFYLVMXFMQTDLQKIMX---MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK13_HUMAN (Mitogen-activated protein kinase 13 OS=Homo sapiens GN=MAPK13 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+L+L+ + H NVI L  + T   S       YLV  +M+ DL  ++    ++F+E +++  ++Q+L GL++ H+ GV+HRD+K  NL +++D  LKI DFGLA   D      MT  VVT WYR PE++L    Y   VD+WS GCI+AE+L GK +  G+  ++QL +I K+ G P  E
Sbjct:   51 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: ICK_RAT (Serine/threonine-protein kinase ICK OS=Rattus norvegicus GN=Ick PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 72/199 (36.18%), Postives = 121/199 (60.80%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            +++A+KK++      E    + RE+  L++L+H N++KL+ ++  R +  LY +F YM+ +L  L+      F E  ++  M+Q+L GL   H +G  HRD+K  NLL     ++KIADFGLA   +   + P T  V T WYR PE+LL +T+Y   +D+W+ GCI+AE+   +P+ PG +E++ + KI ++ G+P +
Sbjct:   28 ELIAIKKMKRKFYSWEECMNL-REVKSLKKLNHANIVKLKEVI--RENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLLCMGPELVKIADFGLAR--EIRSRPPYTDYVSTRWYRAPEVLLRSTNYSSPIDVWAVGCIMAEVYTLRPLFPGASEIDTIFKICQVLGTPKK 221          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_NEUCR (Mitogen-activated protein kinase hog-1 OS=Neurospora crassa GN=hog-1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_GIBZE (Mitogen-activated protein kinase HOG1 OS=Gibberella zeae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_GIBIN (Mitogen-activated protein kinase HOG1 (Fragment) OS=Gibberella intermedia GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:    1 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 191          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_FUSCU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Fusarium culmorum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:    1 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 191          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HOG1_MAGGR1.002e-3239.39Mitogen-activated protein kinase HOG1 OS=Magnaport... [more]
HOG1_CHAGB1.002e-3239.39Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
CDKL1_RAT1.002e-3239.49Cyclin-dependent kinase-like 1 OS=Rattus norvegicu... [more]
MK13_PANTR1.308e-3239.11Mitogen-activated protein kinase 13 OS=Pan troglod... [more]
MK13_HUMAN1.308e-3239.11Mitogen-activated protein kinase 13 OS=Homo sapien... [more]
ICK_RAT1.308e-3236.18Serine/threonine-protein kinase ICK OS=Rattus norv... [more]
HOG1_NEUCR1.308e-3239.39Mitogen-activated protein kinase hog-1 OS=Neurospo... [more]
HOG1_GIBZE1.308e-3239.39Mitogen-activated protein kinase HOG1 OS=Gibberell... [more]
HOG1_GIBIN1.308e-3239.39Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_FUSCU1.308e-3239.39Mitogen-activated protein kinase HOG1 (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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