DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 74/183 (40.44%), Postives = 111/183 (60.66%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            REI IL R  H N+I +  ++   +      +Y+V   ME DL  L+ +   + +   +  +++Q+L GL++ H+  VLHRD+K SNLL++    LKI DFGLA   DP H H   +T  V T WYR PE++L +  Y   +D+WS GCILAE+L+ +PI PG+  ++QL+ I  + GSPS +
Sbjct:  133 REITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQ--RLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRD 313          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 76/195 (38.97%), Postives = 109/195 (55.90%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG 586
            +IVA+K+      +P   K   REI +L++L HPN++ L  L   R    L+LVF Y +H +   +   +    EP VK    Q L  +  CH +  +HRD+K  N+LI     +K+ DFG A        +  T  V T WYR PELL+G T YG  VD+W+ GC+ AELL+G P+ PG+++V+QL+ I K  G
Sbjct:   28 QIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPENILITKQSAIKLCDFGFARLLTGPGDY-YTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 219          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG 586
            +IVA+KK      +P   K   REI +L++L HPN++ L  L   R    L+LVF Y +H +   +   +    E  VK    Q L  +  CH +  +HRD+K  N+LI    V+K+ DFG A        +  T  V T WYR PELL+G T YG  VD+W+ GC+ AELL+G P+ PG+++V+QL+ I K  G
Sbjct:   28 QIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLAGPSDY-YTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 219          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 85/202 (42.08%), Postives = 122/202 (60.40%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            VA+KK+   FDN   ++++ + RE+ +LR L H NVI L+ +   V  R    +YLV+  M+ DL  ++ S +   +    + ++ QLL GL++ H+ G+LHRD+K  NLL++ +  LKI DFGLA   +   +  MT  VVT WYR PELLL   +YG  +D+WS GCI AELL  KPI PG   + QL  I  + G+ SE
Sbjct:   58 VAIKKINNVFDN-RVDALRTL-RELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSSQ-PLSNDHCQYFLFQLLRGLKYLHSAGILHRDLKPGNLLVNANCDLKICDFGLARTNNTKGQF-MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIVNVLGTMSE 255          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK13_RAT (Mitogen-activated protein kinase 13 OS=Rattus norvegicus GN=Mapk13 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+L+L+ + H NVI L  + T   S       YLV  +M+ DL  ++    ++F+E +V+  ++Q+L GL++ H+ G++HRD+K  NL +++D  LKI DFGLA   D      MT  VVT WYR PE++L    Y   VD+WS GCI+AE+L GK +  G+  ++QL +I K+ G P  E
Sbjct:   51 VAIKKLSRPFQSEIFAKRAYRELLLLKHMHHENVIGLLDVYTPATSVRNFQDFYLVMPFMQTDLQKIMG---MEFSEEKVQYLVYQMLKGLKYIHSAGIVHRDLKPGNLAVNEDCELKILDFGLARHTDAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAE 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK13_MOUSE (Mitogen-activated protein kinase 13 OS=Mus musculus GN=Mapk13 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+L+L+ + H NVI L  + T   S       YLV  +M+ DL  ++    ++F+E +V+  ++Q+L GL++ H+ G++HRD+K  NL +++D  LKI DFGLA   D      MT  VVT WYR PE++L    Y   VD+WS GCI+AE+L GK +  G+  ++QL +I K+ G P  E
Sbjct:   51 VAIKKLSRPFQSEIFAKRAYRELLLLKHMHHENVIGLLDVFTPASSLRSFHDFYLVMPFMQTDLQKIMG---MEFSEDKVQYLVYQMLKGLKYIHSAGIVHRDLKPGNLAVNEDCELKILDFGLARHTDTE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAE 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK13_BOVIN (Mitogen-activated protein kinase 13 OS=Bos taurus GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+L+L+ + H NVI L  + T   S       YLV  +M+ DL  ++    ++F+E +++  ++Q+L GL++ H+ GV+HRD+K  NL +++D  LKI DFGLA   D      MT  VVT WYR PE++L    Y   VD+WS GCI+AE+L GK +  G+  ++QL +I K+ G P  E
Sbjct:   51 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFHDFYLVMPFMQTDLQKIMG---MEFSEDKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHTDVE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAE 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_TRIHA (Mitogen-activated protein kinase hog1 OS=Trichoderma harzianum GN=hog1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_NEOFI (Mitogen-activated protein kinase hog1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hog1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/198 (39.90%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H N+I L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+LI+++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_GLOLA (Mitogen-activated protein kinase HOG1 OS=Glomerella lagenarium GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERKA_DROME1.308e-3240.44Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
CDKL1_MOUSE1.308e-3238.97Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
CDKL1_HUMAN1.308e-3239.49Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=... [more]
MPK4_ORYSJ1.708e-3242.08Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
MK13_RAT1.708e-3239.11Mitogen-activated protein kinase 13 OS=Rattus norv... [more]
MK13_MOUSE1.708e-3239.11Mitogen-activated protein kinase 13 OS=Mus musculu... [more]
MK13_BOVIN1.708e-3239.11Mitogen-activated protein kinase 13 OS=Bos taurus ... [more]
HOG1_TRIHA1.708e-3239.39Mitogen-activated protein kinase hog1 OS=Trichoder... [more]
HOG1_NEOFI1.708e-3239.90Mitogen-activated protein kinase hog1 OS=Neosartor... [more]
HOG1_GLOLA1.708e-3239.39Mitogen-activated protein kinase HOG1 OS=Glomerell... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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