DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_CRYPA (Mitogen-activated protein kinase HOG1 OS=Cryphonectria parasitica GN=HOG1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 77/198 (38.89%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H N+I L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q++ GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_BOTFB (Mitogen-activated protein kinase hog1 OS=Botryotinia fuckeliana (strain B05.10) GN=hog1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/198 (39.90%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDVWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_BLUGR (Mitogen-activated protein kinase HOG1 OS=Blumeria graminis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/198 (39.90%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_ASPFU (Mitogen-activated protein kinase hog1 OS=Aspergillus fumigatus GN=hog1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 79/198 (39.90%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H N+I L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+LI+++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_ALTBR (Mitogen-activated protein kinase HOG1 OS=Alternaria brassicicola GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H N+I L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 86/208 (41.35%), Postives = 120/208 (57.69%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLVAS-PEVKFTEP--QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+KKV  D       +F  RE+ I+R+LDH N+++L     S    +    L LV  Y+   +  +       K T P   VK YM+QL   L + H+ G+ HRDIK  NLL+D D  VLK+ DFG A         P  S + + +YR PEL+ GATDY   +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E
Sbjct:   80 ELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDMWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MOK_HUMAN (MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN=RAGE PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.231e-32
Identity = 77/195 (39.49%), Postives = 115/195 (58.97%), Query Frame = 2
Query:   20 KVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            K RF+++E  +     REI  LRRL+ HPN++ L  +V  R S SL L+   M+ ++  L+       +E ++  YM+QL   L+H H NG+ HRD+K  N+LI  D VLK+ DFG  S      K P T  + T WYR PE LL    Y   +DLWSAGC+  E+ + +P+ PG  E++Q+ KI+ + G+P+++
Sbjct:   36 KQRFESIEQVN---NLREIQALRRLNPHPNILMLHEVVFDRKSGSLALICELMDMNIYELIRGRRYPLSEKKIMHYMYQLCKSLDHIHRNGIFHRDVKPENILIKQD-VLKLGDFG--SCRSVYSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQISKIHDVIGTPAQK 224          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_PHANO (Mitogen-activated protein kinase HOG1 OS=Phaeosphaeria nodorum GN=HOG1 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.231e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H N+I L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDVWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_MYCGR (Mitogen-activated protein kinase Hog1 OS=Mycosphaerella graminicola GN=Hog1 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.231e-32
Identity = 79/198 (39.90%), Postives = 118/198 (59.60%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H NVI L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I  L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENVISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 236          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_COCMI (Mitogen-activated protein kinase HOG1 OS=Cochliobolus miyabeanus GN=HOG1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.231e-32
Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+      P   K   RE+ +L+ L H N+I L  +  S +   +Y V   +  DL  L+ S  ++  +  ++ +++Q+L GL++ H+ GV+HRD+K SN+L++++  LKI DFGLA   DP     MT  V T +YR PE++L    Y V VD+WSAGCI AE+L GKP+ PG+  V Q   I +L G+P ++
Sbjct:   46 VAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRPLE--KQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDD 236          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HOG1_CRYPA1.708e-3238.89Mitogen-activated protein kinase HOG1 OS=Cryphonec... [more]
HOG1_BOTFB1.708e-3239.90Mitogen-activated protein kinase hog1 OS=Botryotin... [more]
HOG1_BLUGR1.708e-3239.90Mitogen-activated protein kinase HOG1 OS=Blumeria ... [more]
HOG1_ASPFU1.708e-3239.90Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
HOG1_ALTBR1.708e-3239.39Mitogen-activated protein kinase HOG1 OS=Alternari... [more]
GSK3B_RAT1.708e-3241.35Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
MOK_HUMAN2.231e-3239.49MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN... [more]
HOG1_PHANO2.231e-3239.39Mitogen-activated protein kinase HOG1 OS=Phaeospha... [more]
HOG1_MYCGR2.231e-3239.90Mitogen-activated protein kinase Hog1 OS=Mycosphae... [more]
HOG1_COCMI2.231e-3239.39Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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