DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.389e-26
Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDL-AGLVASPEVKFTEP--QVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+ I+R  DHPNV++L       T +    L LV  ++   +   L    ++    P   V+ Y +Q+   L + H   GV HRDIK  NLL++     LKI DFG A    P    P  S + + +YR PEL+ GAT+Y   +D+WS GC++AELL G+P+ PG + ++QL +I K+ G+P+ E
Sbjct:  160 VAIKKVLQDK------RYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEFVPETVYRALKHYTKMNQHMPIILVQLYTYQICRALNYLHRVVGVCHRDIKPQNLLVNTHTHQLKICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTNAIDMWSGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTRE 357          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.389e-26
Identity = 72/213 (33.80%), Postives = 117/213 (54.93%), Query Frame = 2
Query:    2 KIVALKKVR-FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN---------HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVA+KK+  FD  +P       REI IL+   H N+I +  +    +      +Y++   M+ DL  ++++  +  ++  ++ +++Q L  ++  H + V+HRD+K SNLLI+ +  LK+ DFGLA   D +          +  MT  V T WYR PE++L +  Y   +D+WS GCILAEL   +PI PGR    QL  I+ + G+P  +
Sbjct:   37 EIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK8_CAEEL (Cell division protein kinase 8 OS=Caenorhabditis elegans GN=cdk-8 PE=2 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 5.323e-26
Identity = 76/203 (37.44%), Postives = 111/203 (54.68%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVA------SPEVKFTEPQ--VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV------LKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------VEQLHKIYKLCGSPSE 598
            REI + R L HPN+I L+ +  +     ++L+  Y EHDL  ++       S +V    P+  VK  + Q+LSG+ + H+N VLHRD+K +N+L+  DG       +KIAD G +  +  N   PM      VVT WYR PELLLGA  Y   +D+W+ GCI AELL  +P+   + E          +Q+ +I+ L G PS+
Sbjct:   73 REIALFRELRHPNLICLQRVFLTNEK-KVWLLLDYAEHDLWHVIKHHRTAKSKKVPIMVPRNMVKNILFQILSGMHYLHSNWVLHRDLKPANILLMGDGPPDMRGRVKIADLGFSRIY-ANPLKPMAELDPVVVTFWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTAEPLFFCKEEDIKAQNPYHYDQVKRIFHLLGYPSD 273          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MAPK2_PNECA (Mitogen-activated protein kinase 2 OS=Pneumocystis carinii GN=MKP2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.952e-26
Identity = 63/183 (34.43%), Postives = 108/183 (59.02%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSR---MSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            RE+ +LR  +H N+I +  +   +       +YL+   ME D+  ++ + ++  ++   + +++Q+L  L+  H+  +LHRD+K SNLL++ +  LK+ DFGLA  +    +    MT  V T WYR PE++L   +Y   +D+WS GCILAE+L+G+P+ PG+    QL  I  + G+P+ E
Sbjct:   61 REMKLLRYFNHENIISILDIQQPQDFESFSEVYLIQELMETDMHRVIRTQDL--SDDHCQYFIYQILRALKAMHSADILHRDLKPSNLLLNANCDLKVCDFGLARSAVSTEDSSSFMTEYVATRWYRAPEIMLTFKEYTKAIDIWSVGCILAEMLSGRPLFPGKDYHHQLMLILDVLGTPTME 241          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK8_CAEBR (Cell division protein kinase 8 OS=Caenorhabditis briggsae GN=cdk-8 PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.952e-26
Identity = 75/203 (36.95%), Postives = 108/203 (53.20%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEP--------QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV------LKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------VEQLHKIYKLCGSPSE 598
            REI + R L HPN+I L+ +  +     ++L+  Y EHDL  ++       T+          VK  + Q+LSG+ + H+N VLHRD+K +N+L+  DG       +KIAD G +  F  N   PM      VVT WYR PELLLGA  Y   +D+W+ GCI AELL  +P+   + E          +Q+ +I+ L G PS+
Sbjct:   70 REIALFRELRHPNLICLQRVFLTNEK-KVWLLLDYAEHDLWHVIKHHRTAKTKKVPIMVPRNMVKNILFQILSGMHYLHSNWVLHRDLKPANILLMGDGGPDMRGRVKIADLGFSRIF-ANPLKPMAELDPVVVTFWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTAEPLFFCKEEDIKAQNPYHYDQVKRIFHLLGYPSD 270          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.079e-26
Identity = 67/200 (33.50%), Postives = 111/200 (55.50%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+          K   RE  +++ ++H N+I L    T + +      +YLV   M+ +L  ++   ++     ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   Y   VD+WS GCI+ E++ G  + PG   ++Q +KI +  G+PS
Sbjct:   50 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQRNLEEFQDVYLVMELMDANLCQVI---QMDLDHDRMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKADCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILG-MGYTENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIEQLGTPS 243          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_SCHPO (Serine/threonine-protein kinase prk1 OS=Schizosaccharomyces pombe GN=prk1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.023e-25
Identity = 67/195 (34.36%), Postives = 108/195 (55.38%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV---ASPEVKFTEPQV-KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-----------EVEQLHKIYKLCGSPSEE 601
            RE+++ R + H N++ L  ++    + S+  VF Y EHDL  ++   +    +   P + K  + Q+++G+ + H N ++HRD+K +N++I   G +KI D GL     DP      + RVV T+WYR PELLLGA DY   +D+W+ GCI  E+LA  P+  G             +  Q+ +I +L G+P+EE
Sbjct:   60 REMMLCREIQHENIVSLVQVLLKDGTISM--VFEYAEHDLLQIIHFHSRSRTRQIPPSILKSILWQIINGVAYLHENWIMHRDLKPANIMITATGKVKIGDLGLGRLIRDPILPFYSSDRVVVTIWYRAPELLLGAHDYTPAIDVWAIGCIYGEMLALSPLFKGDEIKMEDKKVVPFQSTQMLRIMELLGTPTEE 252          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CSK2A_DICDI (Casein kinase II subunit alpha OS=Dictyostelium discoideum GN=casK PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.450e-25
Identity = 73/188 (38.83%), Postives = 110/188 (58.51%), Query Frame = 2
Query:   38 LEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGS 589
            L+P   K + REI IL+ L   PN+I L  +V    S +  L+F Y+ + D   L  SP +  T+  V+ Y+ +LL  L+ CH+NG++HRD+K SN++ID     L + D+GLA F+ PN  + +  RV +  Y+ PELL+   DY   +D+WS GC+ A +L  K P   G   ++QL KI K+ G+
Sbjct:   78 LKPVKKKKIKREIKILQNLCGGPNIITLYDVVRDPQSKTPSLIFEYINNTDFKHL--SPTL--TDFDVRYYIRELLHALDFCHSNGIMHRDVKPSNVMIDHQKRKLYLIDWGLAEFYHPNQDYNV--RVASRPYKGPELLVDMEDYDYSLDMWSLGCMFAGMLFQKDPFFHGHDNIDQLVKIVKILGT 259          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.506e-25
Identity = 69/208 (33.17%), Postives = 107/208 (51.44%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLVASPEVK----FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            + VA+KK+R    +P   + + RE  +L+ + H N+I    + T         +Y+V  +    L  ++           T+  +K  ++Q++  L++ H+  ++HRD+K  NL + DD  L I DFGLA   +      +T  V T WYR PE++    D Y    D+WS GCI AELL G+P+ PG     Q  +I +LCGSP EE
Sbjct:  145 RYVAIKKMREPFFDPHHARRIFRETKLLQLMRHDNIICALDIYTPDEENDFRDVYVVTEFAGRSLYQILKQQRDYGRRVLTDEHIKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDSDLMILDFGLARSLEKKDTS-LTQYVQTRWYRSPEVIYWKIDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPDEE 351          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MRK1_YEAST (Serine/threonine-protein kinase MRK1 OS=Saccharomyces cerevisiae GN=MRK1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.506e-25
Identity = 72/206 (34.95%), Postives = 111/206 (53.88%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS---CSLYLVFHYMEHDLAGLV---ASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGV-LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  ++ L HPN + L+     +       L LV  YM   L   +    + +++    ++K Y +QL   L + HN   + HRDIK  NLL+D      KI DFG A    P+   P  S + + +YR PEL+ GAT+Y   VD+WS+ C++AELL GKP+  G + ++QL +I K+ G P+++
Sbjct:  190 VAIKKVLQDR------RYKNRELETMKMLCHPNTVGLQYYFYEKDEEDEVYLNLVLDYMPQSLYQRLRHFVNLKMQMPRVEIKFYAYQLFKALNYLHNVPRICHRDIKPQNLLVDPTTFSFKICDFGSAKCLKPDQ--PNVSYICSRYYRAPELMFGATNYSNQVDVWSSACVIAELLLGKPLFSGESGIDQLVEIIKIMGIPTKD 387          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KSGT_BRANA2.389e-2636.89Shaggy-related protein kinase theta OS=Brassica na... [more]
FUS3_YEAST2.389e-2633.80Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
CDK8_CAEEL5.323e-2637.44Cell division protein kinase 8 OS=Caenorhabditis e... [more]
MAPK2_PNECA6.952e-2634.43Mitogen-activated protein kinase 2 OS=Pneumocystis... [more]
CDK8_CAEBR6.952e-2636.95Cell division protein kinase 8 OS=Caenorhabditis b... [more]
JNK_DROME9.079e-2633.50Stress-activated protein kinase JNK OS=Drosophila ... [more]
SSN3_SCHPO2.023e-2534.36Serine/threonine-protein kinase prk1 OS=Schizosacc... [more]
CSK2A_DICDI3.450e-2538.83Casein kinase II subunit alpha OS=Dictyostelium di... [more]
PMK3_CAEEL4.506e-2533.17Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]
MRK1_YEAST4.506e-2534.95Serine/threonine-protein kinase MRK1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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