CX043843

Overview
NameCX043843
Unique NameCX043843
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.548e-16
Identity = 50/196 (25.51%), Postives = 98/196 (50.00%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +   PVI+M+ ++ EE   + +  ++  C+ WGFF+LVNHG+    ++ +++  +  +   ME++ K       +EG     + +E   +DW   + +  LP         P L    R  ++ ++  L+ LAE L+  + E L ++   +++ F   +    G ++  YPPCP+ + + GL  H+DA  + +L Q
Sbjct:    1 MESFPVINMEKMNGEERA-ATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLP--QSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16
Identity = 60/200 (30.00%), Postives = 99/200 (49.50%), Query Frame = 1
Query:  190 QIPVIDMQSLHSEESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKL------DWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRM--NYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +IPVI++  L S   +  E+  K+    +++GFFQ+VNHG+    ++K+   V  F     + K++Y+ R    + F + F+ S    L      +W D    + +  +   P  FP +    R+ L  YS  ++ L   L   + E L +K   + E   +  +G+ +  +YYP CPQPE   G S HSD+  LTIL+Q
Sbjct:   90 KIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSR----DRFNKNFLYSSNYVLIPGIACNWRDTMECI-MNSNQPDPQEFPDV---CRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEM--DCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ 279          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.013e-15
Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 1
Query:   91 VQELVKNPALVVPDRYIRP-DQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEG---FGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRM----NYYPPCPQPEKVMGLSPHSDAAALTILL 759
            V  L    A  +PD ++ P D+  P  +D +L    P+IDM     E       A LD   KE+GF Q+VNHG+S   L ++      FF++  E+K +++            G AF    E+   W D+  ++  P+       +P  P  LRE +  Y+   + +A  ++  + E L ++ +    FF   + G R+    NYYPP P P + +GL PH D   +T+LL
Sbjct:    4 VMNLTPVHASSIPDSFLLPADRLHPATTDVSL----PIIDMSRGRDEVRQ----AILDSG-KEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKY--WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPD----FFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLL 218          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15
Identity = 61/222 (27.48%), Postives = 103/222 (46.40%), Query Frame = 1
Query:  118 LVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLI-SKMGEV-LNIKDEEMREFFEN-----GLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            L   D  +RP   S  +S D +   IPVID+       S       +    K WG FQ+ NHG+S   L+ ++   +  F++  E K +       + G+G+  +    +K  W++ F++           L+P         ++ Y  E++ LA  L+   +G + + ++D E     E      G   +R+N+YP CP+PE+ MGL+ H+D+  LTIL Q
Sbjct:   27 LTAADSLLRP---SSAVSFDAVEESIPVIDL-------SNPDVTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQ 238          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 67/254 (26.38%), Postives = 110/254 (43.31%), Query Frame = 1
Query:   13 YKAAAILKGFEEQKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSL-HSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDME-GFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPK---LPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            Y  A+ LK F+E K+           V+ LV      VP  +  P  +       + +  IP ID+  +  S    +S +AK+    +++GFFQ +NHG+    +EK+   +  F +   E +K ++ R    +  +     + E     W D  S +  P         PK   LP    E +  YS E+  LAE +   + E L +    ++E        M  + +PPCP+P +  G + H+D + LTILL
Sbjct:    5 YDRASELKAFDEMKIG----------VKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPD-------VPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILL 241          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 54/196 (27.55%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  208 MQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDM--EGFGQAFVVSEEQ----KLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            M+ L      D+ +A L   C+ WGFF+L+NHG+S    E+ +        ++ E  +++++R  +   + F    + S E      LDW   F +  LP         P L      T++ +++ L+ LAE L+  + E L ++   ++  F  G  G+     +++ YPPCP+PE + GL  H+DA  + +L Q
Sbjct:    1 MELLEGSRRSDA-MAVLRDACENWGFFELLNHGISHEPNEQSE-------TVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTS--NISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQ 186          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 56/203 (27.59%), Postives = 95/203 (46.80%), Query Frame = 1
Query:  187 SQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKL---PPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEK-------VMGLSPHSDAAALTIL 756
            S IPVIDM    S+ ++          C+++GFF+++NHG+S   +  L+ E   FF+L   EK    Q  G   G+G +  +     + W + + +M          LFP L   P + R  LE Y+  ++ +  +++ K+ + L IK           +N    +R+N+YPPCP   K       V+G   H+D   +++L
Sbjct:   16 SLIPVIDMSDPESKHALVK-------ACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKT---QVAGYPFGYGNS-KIGRNGDVGWVE-YLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVL 206          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 57/199 (28.64%), Postives = 97/199 (48.74%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMT-LPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQG----MRMNYYPPCPQPEKVMGLSPHSDAAALTILL 759
            +  +P+ID+ S   +E   S L       KE GFFQ+VNHG+S   +  ++   E FF+L   +K   +  +R      F  A   +  +K  W D   +    PV     + +P  P  LR+ +E ++ + + + + L+  + E + I+     ++FE  L G    + +N+YP CP P+K +G  PH D   +T+LL
Sbjct:   32 VVSLPIIDL-SCGRDEVRRSILE----AGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY-WRDCLRLACPFPVD-DSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQ----ADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLL 219          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12
Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 1
Query:  190 QIPVIDMQSLHSEESMDSELAKLDFVC--KEWGFFQLVNHGMSTAFLEKLKKEVEGFFN--LSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            ++PVID+  L S E +  +      V   KEWGFFQ+VNHG+     E +  E +  F+   S++ ++++     +   +G     S  Q    ++ F ++     L +         +LR  +E Y  E+  +A+ +   +G+ +N+  E     FE     +R+N Y P     +V GL PH+D + LTIL Q
Sbjct:   39 KLPVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQ-YSVSEAFHII-----LSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQ 227          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.514e-11
Identity = 52/215 (24.19%), Postives = 96/215 (44.65%), Query Frame = 1
Query:  139 IRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLP--VHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPE----KVMGLSPHSDAAALTIL 756
            ++P + +PL +       IPV+D+    ++  + +        C+++GFF+LVNHG+    +  L+ E   FF  S  EK +    P D  G+G    +     + W +   + T P  +  +   +F + P   R  +E Y   +K +   ++  M E L I+           E      R+N+YPPCP+ +     ++G   H+D   +++L
Sbjct:   15 LKPFKSTPLFTG------IPVVDLTHPDAKNLIVN-------ACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDR--AGPPDPFGYGSK-RIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVL 213          
The following BLAST results are available for this feature:
BLAST of CX043843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
ACCO_DIOKA4.548e-1625.511-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
DV4H_CATRO5.939e-1630.00Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
IDS2_HORVU1.013e-1529.44Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3OX4_ARATH2.257e-1527.48Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
GSL_ARATH6.567e-1526.38Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCO_DENCR1.617e-1327.551-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
G2OX1_ARATH2.112e-1327.59Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
IDS3_HORVU4.706e-1328.642'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
G2OX7_ARATH1.788e-1227.69Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
G2OX_PHACN1.514e-1124.19Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13G06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13G06-N11-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043843 ID=CX043843; Name=CX043843; organism=Citrus sinensis; type=EST; length=764bp
TTCCAAAATCAATACAAAGCTGCAGCAATCTTGAAAGGATTTGAGGAACA
AAAGATGGCCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGT
TGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACGTCCAGAT
CAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGATACCAGT
TATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAG
CCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAAT
CATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGG
ATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAG
GAGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAG
CTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAG
GAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGG
AAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAA
ATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGA
AAATGGACTGCAAGGAATGAGGATGAATTATTACCCTCCATGTCCTCAGC
CCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACC
ATTCTGCTACAACT
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