CX043833

Overview
NameCX043833
Unique NameCX043833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.427e-17
Identity = 77/274 (28.10%), Postives = 128/274 (46.72%), Query Frame = 1
Query:   25 CVQTLMGFESTKHQQHIHLMSALVNKSIAETKLPTSYFSNFSSQLLAKDFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKHDIQTWLGAALTFQQTCKDSV---NSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVS----AKNRKLLQAPRI--NANVIVAQDGTGNYRTVSEAISAASGNR---FVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            C +TL    +        L    V  +I E       FSN      A       A    C E++ +++ +L +++     S  KN  D++TWL +  T+Q+TC D++   N   L+   E   K S      +++TSN LA++  + + +      + RR   E G+    V+     + R+LL++  +   A ++VA+DG+G YRT+ EA++          +IYVK GVY E +R  K    + ++GDG+  TI++   N   GT    TAT
Sbjct:   81 CFETLGSAPNASRSSPEELFKYAVKVTITELSKVLDGFSNGEHMDNATS-----AAMGACVELIGLAVDQLNETM----TSSLKNFDDLRTWLSSVGTYQETCMDALVEANKPSLTTFGENHLKNS------TEMTSNALAIITWLGKIA--DTVKFRRRRLLETGNAKVVVADLPMMEGRRLLESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETAT 337          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.427e-17
Identity = 76/210 (36.19%), Postives = 109/210 (51.90%), Query Frame = 1
Query:  193 TDHCEEMMSMSLKRLEKS---LLALQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLL----QAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGD---DNARR 777
            T+  EEMM  +  R+ +S   LL  +     +  +I TWL   LT   TC D +       R E      Q  D +S+     LAL   I     P+++T    L+    + P+W+S  ++K L    +A +  A+V+VA+DGTG Y TV+ AI+AA   S  RF+IY+K G+Y E   I   K  +TLIGDG+ +TIITG+    N RR
Sbjct:   93 TNLFEEMMESAKDRMIRSVEELLGGEFPYLGSYENIHTWLSGVLTSYITCIDEIGDGAYKRRVE-----PQLQDLISK-AKVALALFISIS----PRDNT---ELNSVVPNSPSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRR 289          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16
Identity = 63/202 (31.19%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  283 HDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRAS-----YPKNS--------------TYNRRLDEEQGDFPNWVSAKNRKLLQAPRINA--NVIVAQDGTGNYRTVSEAISAAS-----GNRFVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            HD QT L AA+  Q TC++      L++       +    + L++  SN LA+      A      YP                 ++ R L      FP+W    +RKLL+  +  A  +++VA+DG+G+Y ++ +A++AA+       R VIYVKAGVY+E +   K    + +IGDG  +TI+TG+ N + GT+   +AT
Sbjct:  132 HDRQTSLSAAIANQDTCRNGFRDFKLTSSYSKYFPVQFHRN-LTKSISNSLAVTKAAAEAEAVAEKYPSTGFTKFSKQRSSAGGGSHRRLLLFSDEKFPSWFPLSDRKLLEDSKTTAKADLVVAKDGSGHYTSIQQAVNAAAKLPRRNQRLVIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSAT 332          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.949e-16
Identity = 82/290 (28.28%), Postives = 131/290 (45.17%), Query Frame = 1
Query:   85 SALVNKSIAETKLPTSYFSNFSSQL---LAKDFQGV-RAVTDHCEEMMSMSLKRLEKSLLA----LQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYP--------KNSTYN-------RRL--DEEQGDFPNWVSAKNRKLLQ-----AP---------------RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIR--TNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            S LV   +  TK   +  SNF++     +  +     +AV D+C+ ++  +L+ LE  +      LQ S TK    ++ WL     +Q  C D +  +      E+ K + + +     LTSN + + + +  A           KN T         RRL  D +    P W S K+RKL+      AP               +I A  +VA+DG+G ++T+SEA+ A    +  R +I++KAG+Y E++R    K+ I + GDG   TIIT D + +     PGT T
Sbjct:   74 SKLVKAFLMATKDAITKSSNFTASTEGGMGTNMNATSKAVLDYCKRVLMYALEDLETIVEEMGEDLQQSGTK-LDQLKQWLTGVFNYQTDCLDDIEEV------ELKKIMGEGISNSKVLTSNAIDIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDNDSKGLPKWFSGKDRKLMAKAGRGAPAGGDDGIGEGGGGGGKIKATHVVAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLS---PGTTT 353          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.440e-15
Identity = 73/220 (33.18%), Postives = 98/220 (44.55%), Query Frame = 1
Query:  160 LAKDFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            +  D  GV+  T+  EEMM                   +N H   TWL + LT   TC D +       R      +  K++ L       LAL   I           N  L     + P+W+   ++K L      A+V+VA+DGTG Y TV+ AI+AA   S  RFVIY+K G+Y E   I   K  +TLIGDG+  TIITG+ +A        TAT
Sbjct:   81 MENDMLGVKEDTNLFEEMMESE----------------ENSH---TWLSSVLTSYITCIDEIGEGAYKRR------VEPKLENLISRARVVLALFISISLRD-------NTELISVIPNGPSWLFHVDKKDLYLNAEIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTAT 268          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15
Identity = 80/283 (28.27%), Postives = 132/283 (46.64%), Query Frame = 1
Query:   85 SALVNKSIAETKLPTSYFSNFSSQL---LAKDFQGV-RAVTDHCEEMMSMSLKRLEKSLLA----LQNSPTKNKHDIQTWLGAALTFQQTCKDSVNS------LGLSARNEVIKKISQKMDYLSQLTSNPLALVNRID---RASYPKNSTYNRRL--DEEQGDFPNWVSAKNRKLLQ------AP-------------RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            S L+   +  TK   +  +NF++     + K+     +AV D+C+ ++  +L+ LE  +      LQ S +K    ++ WL     +Q  C D +        +G   R+  I   S  +D    LT+    +  ++D   + +  +    +R L  D +Q   P W S K+RKL+       AP             +I    +VA+DG+G ++T+SEA+ A    +  R +IY+KAGVYKE++   K  + + + GDG   TIIT D +   G S PGT T
Sbjct:   59 SKLIKAFMLATKDAVTKSTNFTASTEEGMGKNMNATSKAVLDYCKRVLMYALEDLETIVEEMGEDLQQSGSK-MDQLKQWLTGVFNYQTDCIDDIEESELRKVMGEGIRHSKILS-SNAIDIFHALTTAMSQMNVKVDDMKKGNLGETPAPDRDLLEDLDQKGLPKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSV--GLS-PGTTT 336          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-14
Identity = 64/214 (29.91%), Postives = 111/214 (51.87%), Query Frame = 1
Query:  202 CEEMMSMSLKRLEKSLLALQNSPTKNKH---DIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRL---DEEQGDFPNWVSAKNRKLLQAPRIN--ANVIVAQDGTGNYRTVSEA---ISAASGNRFVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            C E++ +++  L  +L +  N          D++TWL +A T+Q+TC +++ +  +    E   K S      ++LTSN LA++  + + +   +    RRL    + + DF        R+LLQ+  +   A+++VA+DG+G YRT+  A   +   S  R +IYVK GVY E ++  K    + ++GDG+  +I++G  N   GT    TAT
Sbjct:  136 CAELLDLTIDNLNNTLTSSSNGDVTVPELVDDLRTWLSSAGTYQRTCVETL-APDMRPFGESHLKNS------TELTSNALAIITWLGKIA--DSFKLRRRLLTTADVEVDFH-----AGRRLLQSTDLRKVADIVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTAT 335          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14
Identity = 79/284 (27.82%), Postives = 133/284 (46.83%), Query Frame = 1
Query:   85 SALVNKSIAETKLPTSYFSNFSSQL---LAKDFQGV-RAVTDHCEEMMSMSLKRLEKSLLA----LQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLS-------ARNEVIKKISQKMDYLSQLTSNPLALVNRID---RASYPKNSTYNRRL--DEEQGDFPNWVSAKNRKLLQ------AP-------------RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            S L+   +  TK   +  +NF++     + K+     +AV D+C+ ++  +L+ LE  +      LQ S +K    ++ WL     +Q  C D +    L        A ++++   S  +D    LT+    +  ++D   + +  +    +R L  D +Q   P W S K+RKL+       AP             +I    +VA+DG+G ++T+SEA+ A    +  R +IY+KAGVYKE++   K  + + + GDG   TIIT D +   G S PGT T
Sbjct:   72 SKLIKAFMLATKDAVTKSTNFTASTEEGMGKNINATSKAVLDYCKRVLMYALEDLETIVEEMGEDLQQSGSK-MDQLKQWLTGVFNYQTDCIDDIEESELRKVMGEGIAHSKILS--SNAIDIFHALTTAMSQMNVKVDDMKKGNLGETPAPDRDLLEDLDQKGLPKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSV--GLS-PGTTT 349          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14
Identity = 48/121 (39.67%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  427 NPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLL-QAPR---INANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGD 762
            +PL  +N +++     +S  +R L EE G+FP WV+  +R+LL + PR   I ANV+VA+DG+G  +T+++A++     +  +FVI++K GVYKEK+   K    +  +GDG   T+ITGD
Sbjct:  342 DPLRKLNPLNKL----DSLKDRHLSEE-GEFPPWVTPHSRRLLARRPRNNGIKANVVVAKDGSGKCKTIAQALAMVPMKNTKKFVIHIKEGVYKEKVEVTKKMLHVMFVGDGPTKTVITGD 457          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.921e-13
Identity = 82/312 (26.28%), Postives = 134/312 (42.95%), Query Frame = 1
Query:   25 CVQTLMGFESTKHQQHIHLMSALVNKSIAETKLPTSYFSNFSSQLLAKDFQGV----RAVTDHCEEMMSMSLKRLEKSLLALQN--SPTKNKHD-IQTWLGAALTFQQTCKDSVN------SLGLSARNEVI----------------KKISQKMDYLSQLTSN--PLALVNRIDRASYPKNSTYNRRL--DEEQGDFPNWVSAKNRKLLQ------------APRINANVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNA--RRGTSMPGTAT 804
            CV+TL   E  K +    L+ A +      TK   +  SNF+ Q        +    +AV D+C+ +   +L+ L   +  +    S   +K D ++ WL     +Q  C D +       ++G    N  I                 KI+ K+D L  +T           +D +         RRL  D ++   P WVS  +RKL+               R+  N +VA+DG+G ++TV +A+ A   N   R +IY+KAG+Y+E+  I   K+ I + GDG   T+I+ + +    RGT+   +AT
Sbjct:   54 CVKTL---EPVKSEDPNKLIKAFM----LATKDELTKSSNFTGQTEVNMGSSISPNNKAVLDYCKRVFMYALEDLATIIEEMGEDLSQIGSKIDQLKQWLIGVYNYQTDCLDDIEEDDLRKAIGEGIANSKILTTNAIDIFHTVVSAMAKINNKVDDLKNMTGGIPTPGAPPVVDESPVADPDGPARRLLEDIDETGIPTWVSGADRKLMAKAGRGRRGGRGGGARVRTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSAT 358          
The following BLAST results are available for this feature:
BLAST of CX043833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PME46_ARATH3.427e-1728.10Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME42_ARATH3.427e-1736.19Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME6_ARATH1.302e-1631.19Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME37_ARATH4.949e-1628.28Probable pectinesterase/pectinesterase inhibitor V... [more]
PME30_ARATH1.440e-1533.18Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME_BRACM9.334e-1528.27Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME24_ARATH1.219e-1429.91Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_BRANA1.592e-1427.82Probable pectinesterase/pectinesterase inhibitor O... [more]
PME43_ARATH1.592e-1439.67Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME4_ARATH3.921e-1326.28Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13G01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13G01-N1-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043833 ID=CX043833; Name=CX043833; organism=Citrus sinensis; type=EST; length=804bp
AGCTTCACTAGATTCCCAATCCTTTGTGTCCAGACATTGATGGGGTTTGA
GAGTACAAAACATCAACAACACATCCATCTTATGTCTGCTCTCGTTAACA
AAAGCATTGCTGAAACCAAGCTGCCTACTTCATATTTTTCTAATTTCAGC
TCCCAGTTACTTGCCAAAGATTTCCAAGGTGTACGTGCTGTCACAGATCA
CTGCGAAGAGATGATGAGTATGTCACTCAAACGGCTAGAGAAGTCACTAT
TAGCCCTACAAAATTCCCCAACAAAAAACAAGCATGACATCCAAACGTGG
CTCGGCGCTGCGTTGACTTTCCAGCAAACTTGTAAAGACTCTGTGAATAG
CCTCGGTCTCTCAGCGAGAAATGAGGTTATCAAAAAAATATCTCAAAAAA
TGGATTATTTGTCTCAACTGACCAGTAATCCTTTAGCCCTTGTCAACAGG
ATAGACAGGGCTAGTTACCCAAAGAACAGCACATATAATCGGCGTCTAGA
TGAGGAACAAGGTGATTTTCCCAACTGGGTATCGGCGAAAAATAGGAAAC
TGCTGCAGGCCCCGCGCATAAATGCAAATGTGATTGTGGCTCAAGATGGA
ACTGGCAATTATAGAACTGTTTCGGAAGCTATCAGTGCTGCTTCTGGAAA
TCGTTTTGTGATTTATGTGAAGGCAGGTGTTTATAAGGAGAAAATTCGAA
CTAACAAGGACGGTATTACTTTGATAGGAGATGGCAAATACACTACTATT
ATTACTGGTGATGATAATGCTCGTAGAGGCACTTCCATGCCTGGCACCGC
CACT
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