CX043828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043828 vs. ExPASy Swiss-Prot
Match: XYLS_ECOLI (Alpha-xylosidase OS=Escherichia coli (strain K12) GN=yicI PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12 Identity = 69/282 (24.47%), Postives = 112/282 (39.72%), Query Frame = 1 Query: 28 SLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINLNTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKGTSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNL--SVVEDVVENYKKAKIPLDVIWNDDDHMDGHK--DFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIR------------RFHELVPVDGLWID 822 ++YGLGE + T+ T + Y + P YM R G H + G + K + + + + +++ GP+P AV+D+YT F GRPA P WS G N + V ++ + +PL V D M + DF +P +P P+ + ++ G+K V I+P IG S V++ +K +G + W + DF NP W+ D+++ F E +P D W D Sbjct: 161 TVYGLGER-----FTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGY-GVLVNHPQCVSFEVGSE---KVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPE--GMIRRLKAKGLKICVWINPYIGQKSP--VFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFD 429
BLAST of CX043828 vs. ExPASy Swiss-Prot
Match: XYLS_SULSO (Alpha-xylosidase OS=Sulfolobus solfataricus GN=xylS PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11 Identity = 69/281 (24.56%), Postives = 121/281 (43.06%), Query Frame = 1 Query: 10 KLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINL-----NTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKGTSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMD--GHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNE 831 +L + +YGLG++ +G+ + Y D S ++ NTD+ V + + + G + L N + V+++ G D+Y G S V+ Y G +P W+ G+ Q + Y + + VV+ +++ KIPLDVI D + G F + T++PRPK +E+IHK+G K + I P G + +VF E + + G F F + +W ++ F++L +D W+D +E Sbjct: 107 ELSEGERVYGLGQHAGGNGL-----GQSSAYKLDYSGLSTTLSQRNTDIGIPFIVSSKGYGILWDNYSLGSISLRRNKLKVWFEA--------GKKIDYYVIYGDSIDDVIKGYRKLTGDAPLLPKWAYGYWQSKERYKSQDEITSVVKEFRERKIPLDVIVLDWRYWGKYGWNAFKFDETDFPRPK--DMVEEIHKMGAKLAISIWPTFGKET-----------EVFKDMESKGCIIL---GTTAFNPFKDECRELFW-SYVKGFYDL-GIDAYWLDASE 356 The following BLAST results are available for this feature:
BLAST of CX043828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043828 ID=CX043828; Name=CX043828; organism=Citrus sinensis; type=EST; length=887bpback to top |