DC900390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 110 AAITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKIS 388 AAI+CGQV+S ++PCL+Y G PS ACC+GV L TTADR+ AC C+K+ A G+ A +P +CGV I I+P IDCS ++ Sbjct: 26 AAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 118
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20 Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AITCGQV S LAPCLAYL G P CC GV+ L ++ TT DRQ AC C+K AA GI L KA LP CGV+I I+P DCSK+ Sbjct: 24 AITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV 113
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.723e-20 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 107 QAAITCGQVDSFLAPCLAYLTGEGK-PSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKIS 388 +AAI+CGQV S +APC++Y G+G PS CC+GV L + TTADR+AAC C+K+AA G+ A +P +CGV I I+ DCS+++ Sbjct: 26 EAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19 Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A+TCGQV S LAPCL YL G P CC GV+ L TT DRQ AC C+K AA+ + G+ L KA LP C V+I I+P DCSK+ Sbjct: 24 ALTCGQVTSTLAPCLPYLMNRG-PLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKV 113
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.658e-19 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AITCG V S LAPC+ YL G PS ACC G++ L + ADR+ AC C+K AAT +GI KA LP++CGV + I+P+ +C+ I Sbjct: 26 AITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.166e-19 Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 110 AAITCGQVDSFLAPCLAYLTGEG-KPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AAI+CGQV S L+PC++Y G G KP ACC+GV+ L +TAD+QAACKCIK AA G+ KA +P CGV + I+ +DCSKI Sbjct: 25 AAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAA---GGLNAGKAAGIPSMCGVSVPYAISASVDCSKI 114
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19 Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A+TCGQV S LAPCL YL G P CC GV+ L TT DRQAAC C+K AA+ + + L KA LP C V+I I+P DCSK+ Sbjct: 24 ALTCGQVTSTLAPCLPYLMNRG-PLGGCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKV 113
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19 Identity = 46/91 (50.55%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AI+CGQV S L PC YL G ACC GV L + TT DRQ AC C+K I L+ A LP +CG+ IG ITP+IDCSKI Sbjct: 25 AISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19 Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 110 AAITCGQVDSFLAPCLAYLTGEG-KPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AAI+CGQV S L+PC++Y G G KP ACC+GV+ L +TAD+QAACKCIK AA G+ KA +P CGV + I+ +DCSKI Sbjct: 25 AAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAA---GGLNAGKAAGIPSMCGVSVPYAISASVDCSKI 114
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19 Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 110 AAITCGQVDSFLAPCLAYLTGEG-KPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AAI+CGQV S L+PC++Y G G KP ACC+GV+ L +TAD+QAACKCIK AA G+ KA +P CGV + I+ +DCSKI Sbjct: 25 AAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAA---GGLNAGKAAGIPSMCGVSVPYAISASVDCSKI 114 The following BLAST results are available for this feature:
BLAST of DC900390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900390 ID=DC900390; Name=DC900390; organism=Citrus sinensis; type=EST; length=603bpback to top |