DC900390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19 Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A++CGQV S LAPC++YLT G ACC+GV+ L TT DRQAAC C+K A G+ A P +CGV I I+P DCSK+ Sbjct: 25 ALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKV 115
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.302e-19 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 107 QAAITCGQVDSFLAPCLAYLTGEG-KPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKIS 388 +AAI+CGQV S +A CL+Y G+G PS CC+GV L TTADR+AAC C+K+AA G+ A +P +CGV + I+ DCS++S Sbjct: 24 EAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRVS 118
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.231e-19 Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A+TCGQV + LAPCL YL G G P CC GV+ L + TTADR+ AC C+K AA +GI L+KA +P C V+I I+P DCS + Sbjct: 24 ALTCGQVTAGLAPCLPYLQGRG-PLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTV 113
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18 Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A+TCGQV + LAPCL YL G G P CC GV+ L + TTADR+ AC C+K AA +GI L+KA +P C V+I I+P DCS + Sbjct: 24 ALTCGQVTAGLAPCLPYLQGRG-PLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTV 113
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18 Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 116 ITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 ITCGQV S LAPC+ YL G CC GV L + TTADRQAAC C+K A +G+ L+ A LP +CGV + I+P DC + Sbjct: 1 ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSV 90
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.128e-18 Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A++CGQV S LAPCL YL G G P +CC GV+ L + +DR+ AC C+K AA +GI + KA LP CGV+I I+P DCSK+ Sbjct: 24 ALSCGQVQSGLAPCLPYLQGRG-PLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKV 113
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.128e-18 Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 101 RGQAAITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 R A+ CGQVDS + PCL Y+ G PS CC GV L + ++ DRQ C C+K A + L+ A +P +C V++ I+PDIDCS+I Sbjct: 22 RAAVALNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.335e-18 Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 A+TCGQV S LAPC+AY+ G G ACC G+ + + TTADRQ AC C+K + G+ + A LP +CGV++ I+P +C+ + Sbjct: 26 ALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATV 116
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 110 AAITCGQVDSFLAPCLAYLTGE-GKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 +A+TCGQV S LAPC+ Y TG P+ CC GV L TTADRQ C C+K + G++ D +P +CGV+I I+P DCS++ Sbjct: 26 SAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of DC900390 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 113 AITCGQVDSFLAPCLAYLTGEGKPSRACCTGVEYLKDNTPTTADRQAACKCIKDAATRYRGIKLDKARQLPKECGVDIGVPITPDIDCSKI 385 AITC V L PCL YL GKP+ ACC G + L T T ADR+ ACKC K AA + + ++ D A LP +CG+ +PI P+++C+ I Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGKPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115 The following BLAST results are available for this feature:
BLAST of DC900390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900390 ID=DC900390; Name=DC900390; organism=Citrus sinensis; type=EST; length=603bpback to top |