CX043822

Overview
NameCX043822
Unique NameCX043822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17
Identity = 54/168 (32.14%), Postives = 81/168 (48.21%), Query Frame = -3
Query:  165 AINNVSLTLPPT-PYLGSIKHGLKDAFDQNGPPE-----NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGMGVVLAL 647
            +++N S  LP     L ++ H +K  F  + P +     +++N       P    T   +   +L  NTTV+V+LQN   I    +E HP HLHG +F VL  G G +    +              +  P G W  +RF A+NPGAW FHCHI+ HL  G+G++  +
Sbjct:  383 SMSNHSFVLPKKLSILEAVFHDVKGIFTADFPDQPPVKFDYTNPNVTQTNPGLLFTQKSTSAKILKFNTTVEVVLQNHALI---AAESHPMHLHGFNFHVLAQGFGNYDPSRDRSKLNLVDPQSRNTLAVPVGGWAVIRFTANNPGAWIFHCHIDVHLPFGLGMIFVV 547          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = -3
Query:  183 SGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTK-EDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGM 488
            + V  +  N+TV+++LQN   + P   E HP HLHG +F+VLGYG G +    D            NT  + P GW  LRF+A+NPG W FHCH++ HL +G+
Sbjct:  443 TSVKTIRFNSTVEIVLQNTGILTP---ESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNPGIWLFHCHMDAHLPLGI 542          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC5_ARATH (Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = -3
Query:  120 AINNVSLTLPPTPYLGSIKHGLKDAFDQNGPPENFSNEYDVMKPPVNANTT------------LGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALG-----VETVGNIPNQALAC 647
            ++NNVS  LP    L    H        +G P  F+ ++   KPPV  + T             G+ +Y L   + V ++LQ+   + P   E HP HLHG+DF+++  G G F  K+D            NT  +   GW  +RF+ADNPG W  HCH++ H+  G+ +   +      ++T+   P+    C
Sbjct:  399 SMNNVSFALPSNYSLLQAHH--------HGIPGVFTTDFPA-KPPVKFDYTGNNISRSLYQPDRGTKLYKLKYGSRVQIVLQDTGIVTP---ENHPIHLHGYDFYIIAEGFGNFNPKKDTAKFNLEDPPLRNTVGVPVNGWAVIRFIADNPGVWIMHCHLDAHISWGLAMAFLVENGNGVLQTIEQPPHDLPVC 580          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC14_ORYSJ (Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 60/175 (34.29%), Postives = 84/175 (48.00%), Query Frame = -3
Query:  177 NTINGFTKWAINNVSLTLPPTPYL----GSIKHGLKDAFDQNGPPE--NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKF---TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGMGV 674
            N   G    ++NNVS  LP T  L     S   G+      + PP   +F+N   V +      T+ G+ V  L  N TV+V+LQN   +    +E HP HLHG +F+VL  G G +    ++ +           NT  + P GW  +RF ADNPG W  HCH+E HL  G+ +
Sbjct:  388 NRTRGSLAASMNNVSFQLPATMSLLEASRSRSSGVYTRDFPDRPPVMFDFTNAAAVNRNMSLMVTSKGTRVKALRYNETVEVVLQNTAVLG---TENHPLHLHGFNFYVLAQGTGNYYYLIRKKKIRKNLVNPQQRNTIAVPPGGWAVIRFTADNPGVWLMHCHLEAHLPFGLAM 559          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = -3
Query:  183 SGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTK-EDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGM 488
            + V  +  N+TV+++LQN   I P   E HP HLHG +F+VLGYG G +    D            NT  + P GW  LRF+A+NPG W FHCH++ HL  G+
Sbjct:  441 TSVKKIRFNSTVEIVLQNTAIISP---ESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNPGVWLFHCHMDAHLPYGI 540          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 58/166 (34.94%), Postives = 75/166 (45.18%), Query Frame = -3
Query:  174 AINNVSLTLPPTP------YLGSIKHGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGMGVV 647
            ++NN S  LP T       Y GSI  G+      + PP  F    D          T  S  V  L  N+TV ++LQN   +     E HP HLHG +F+VL  G G + +  +              V  P G W  +RFVADNPG W  HCH + HL  G+G+V
Sbjct:  395 SMNNASFILPNTTSMLEAMYKGSID-GVYTRDFPDTPPIVFDYTADASDDNATLKHTFKSTKVKTLKYNSTVQMVLQNTRLVS---KESHPMHLHGFNFFVLAQGFGNYNETTDPAKFNLVDPQERNTVAVPTGGWAVIRFVADNPGVWFMHCHFDAHLEFGLGMV 556          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC4_ARATH (Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 59/178 (33.15%), Postives = 83/178 (46.63%), Query Frame = -3
Query:  126 AINNVSLTLPPTPYLGSIKHGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALGVETVGNIPNQAL 647
            +INNV+  +P T  L +        F  +    PP  F+     +    N  T  G+ +Y L  N TV ++LQ+   I P   E HP HLHG +F+ +G G G F    +              +  P G W  +RF ADNPG W  HCH+E  +H   G+ +A  VE  G  PNQ++
Sbjct:  380 SINNVTFIMPKTALLPAHYFNTSGVFTTDFPKNPPHVFNYSGGSV---TNMATETGTRLYKLPYNATVQLVLQDTGVIAP---ENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 74/243 (30.45%), Postives = 110/243 (45.27%), Query Frame = -3
Query:  126 PRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL---LNTQN-----TINGFTKW----AINNVSLTLPPTPYLGSI-KHGLKDAFDQNGPPENFSNEYDVMK-PPV--NANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALG-VETVGNIPNQAL 791
            P   D   +  FS+ I +L  +  P   PT   +R+     LN Q+     T +G+       ++NN+S   PP   L S  K   K  F  + P E   N +D     PV  N NT  G+ ++ +   + ++++ Q  + +     E HP H+HGH+F+V+G G G F  E +                 P G W A+R  ADNPG W  HCH+E H   G    LA+G +   G +P+Q L
Sbjct:  337 PNMLDTKFATKFSDSIKSLGSAKYPCKVPTKIDKRVITTISLNLQDCPLNQTCDGYAGKRFFASMNNISFVRPPISILESYYKKQSKGVFSLDFP-EKPPNRFDFTGVDPVSENMNTEFGTKLFEVEFGSRLEIVFQGTSFLN---IENHPLHVHGHNFFVVGRGFGNFDPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWG----LAMGFIVKDGPLPSQTL 571          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 55/162 (33.95%), Postives = 73/162 (45.06%), Query Frame = -3
Query:  177 AINNVSLTLPP-TPYLGSIKHGLKDAFDQNGPPENFSNEYDVMKPPVNA---NTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHLHMGMGV 647
            +INNVS  LP  T  L +  HG          P N   ++D     V+        G+ VY L   + V V+LQ  N       E HP HLHG+DF++L  G G F    +              V  P  GW  +RFVADNPG W  HCH++ H+  G+ +
Sbjct:  385 SINNVSFVLPSSTSILQAHHHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF---AGENHPIHLHGYDFYILAEGLGNFDAGADTGKFNVEDPPMRNTVGVPVNGWAVIRFVADNPGVWLMHCHLDVHITWGLAM 543          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC21_ORYSJ (Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 69/235 (29.36%), Postives = 98/235 (41.70%), Query Frame = -3
Query:  174 ITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL--------LNTQNTINGFTKW----------AINNVSLTLPPTP-----YLGSIKHGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHLHMGMGVV 797
            + P  DD D + +F  ++ +L     P   PT+    + +         N  N  +   K           ++NNVS   P        Y GS +   +D F  N  P   +   D  +P V   T  G+ V +L   T V+V+ Q+ +       E HP HLHG  F+V+G G GKF    +            + V  P  GW A+RF ADNPG W  HCH + H+  GM  V
Sbjct:  335 VLPSLDDVDAAMAFLRQLRSLGSKDHPVHVPTHVDEHMLIDLAINFLPCNATNATDTACKGPKGNTTRFAASLNNVSFVSPAIDVLHAYYYGSGRGVYEDDFPNNPAPVFVNLTGDNDRPGV---TKHGAKVKVLEYGTVVEVVFQDTSF------ESHPMHLHGFAFYVVGLGSGKFDDRRDPATYNLLDPPYQSTVSVPKAGWAAIRFRADNPGVWFMHCHFDRHMVWGMNTV 560          
The following BLAST results are available for this feature:
BLAST of CX043822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
LAC7_ARATH1.155e-1732.14Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=... [more]
LAC9_ARATH1.508e-1741.75Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]
LAC5_ARATH1.508e-1729.38Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=... [more]
LAC14_ORYSJ1.508e-1734.29Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC8_ARATH1.970e-1742.72Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]
LAC24_ORYSJ1.970e-1734.94Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC4_ARATH3.360e-1733.15Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV... [more]
LAC1_ARATH3.360e-1730.45Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC17_ORYSJ4.388e-1733.95Putative laccase-17 OS=Oryza sativa subsp. japonic... [more]
LAC21_ORYSJ7.486e-1729.36Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13F06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13F06-L11-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043822 ID=CX043822; Name=CX043822; organism=Citrus sinensis; type=EST; length=799bp
CGAAATTTTATTAATATAAATATCAAAACAACAATAGAAACTCTAGGAAT
AAAGTACATAAAACAAACTAGCTAGCCTCAATTTTGTTTAGGGTTCATGA
ACCTTTTCCCAGTCAAACCACAAGCCAACGCCTGGTTTGGAATATTACCA
ACGGTTTCAACACCAAGAGCAAGAACCACACCCATTCCCATATGCAAATG
GGGCTCAATATGGCAGTGAAATGCCCAAGCACCTGGATTATCAGCAACAA
ATCTTAAAGCAGTCCAGCCATATGGGAATATCACCGCAGTATTTTTCAAT
GGTGGATTCTTCAAGTTAAATTTCTTCTCATCTTCTTTCGTAAACTTCCC
TTCTCCGTACCCTAATACCCAAAAATCATGCCCATGCAAATGCCAAGGGT
GGATTTCACTCACGTTTGGCTTTATCGCGTTTGCATTTTGAAGTATAACA
TCAACTGTGGTGTTTAAACCAAGCATGTAAACCCCACTTCCAAGAGTTGT
ATTAGCGTTTACTGGAGGTTTCATCACGTCATACTCATTCGAGAAGTTTT
CGGGGGGACCATTCTGATCAAAAGCATCTTTAAGACCATGTTTGATGGAT
CCTAAGTAAGGAGTGGGGGGTAAAGTCAGGGACACATTGTTAATAGCCCA
CTTAGTGAACCCGTTAATGGTGTTTTGAGTGTTAAGAAGGGTGAGCCGAC
GGTGGAAATTTGTGGGAGGCTTGGGGGATCCCATTAGGGCAAATATTTTG
TTGGAGAATGATTTGCTGTGATCATAGTCGTCCCATCTAGGAGTTATAG
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