CX043822

Overview
NameCX043822
Unique NameCX043822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 53/163 (32.52%), Postives = 74/163 (45.40%), Query Frame = -3
Query:  183 AINNVSLTLPPTPYLGSIKHGLKDAFDQNGPPENFSNEYDVMKPP---VNAN----TTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGM 647
            ++NNVS   P    L +  +G      +    ENF N+  V+  P   +N      T  G+ V +L   T V+V+ Q+ +       E HP HLHG  F+V+G G G F +  +              V  P   W A+RF ADNPG W  HCH + H+  GM
Sbjct:  399 SLNNVSFQNPAIDVLDAYYYGSGRGVYE----ENFPNKLTVIVNPTGDINGGGPLLTKRGTKVKVLEYGTVVEVVFQDLSI------ENHPMHLHGFTFYVVGRGSGTFDERRDPATYNLIDPPFQNTVSVPKSSWAAIRFRADNPGVWFMHCHFDRHVVWGM 551          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSJ (Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 55/165 (33.33%), Postives = 78/165 (47.27%), Query Frame = -3
Query:  183 INNVSLTLPPTP------YLGSIKHGLKDAFDQNGP-PENFSNEYDVMKPPVNAN---TTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGM 644
            +NNVS   P T       Y G+ K    + F    P P N++N   +   P+      T   + +     NT+V++I Q+   ++   S+ +P HLHG+D ++L  G G F  K D            NT  +   GW A+RFV DNPG W  HCH E H+ MGM
Sbjct:  395 MNNVSFAHPKTTALLERYYDGTSKGVYTEDFPIRPPRPFNYTNRDLIPPGPLEEALEPTFKATKLKRFKYNTSVEIIFQSTTLMQ---SDSNPMHLHGYDVFLLAQGLGNFNAKRDVRKFNYHNPQLRNTVQVPRGGWAAIRFVTDNPGMWYLHCHFEFHIIMGM 556          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSI (Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 55/165 (33.33%), Postives = 78/165 (47.27%), Query Frame = -3
Query:  183 INNVSLTLPPTP------YLGSIKHGLKDAFDQNGP-PENFSNEYDVMKPPVNAN---TTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGM 644
            +NNVS   P T       Y G+ K    + F    P P N++N   +   P+      T   + +     NT+V++I Q+   ++   S+ +P HLHG+D ++L  G G F  K D            NT  +   GW A+RFV DNPG W  HCH E H+ MGM
Sbjct:  395 MNNVSFAHPKTTALLERYYDGTSKGVYTEDFPIRPPRPFNYTNRDLIPPGPLEEALEPTFKATKLKRFKYNTSVEIIFQSTTLMQ---SDSNPMHLHGYDVFLLAQGLGNFNAKRDVRKFNYHNPQLRNTVQVPRGGWAAIRFVTDNPGMWYLHCHFEFHIIMGM 556          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 64/238 (26.89%), Postives = 100/238 (42.02%), Query Frame = -3
Query:  126 PRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNT------QNTINGFT----KWAINNVSLTLPP-TPYLGSIKHGLKDAFDQNGP--PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKF--TKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALGVETVGNIPNQAL 791
            P ++D   +  F  KI  L     P     R +T ++       QN+  G        ++NN+S   P     L +  + +K  +    P  P    N     +P       L + V ++     V++++Q  + +   +   HP HLHG  F+V+G G G +  ++ED               +  P  GW A+RFVADNPG W  HCH++ H   GM VV    +   G  PNQ +
Sbjct:  321 PFYNDTSAAFGFFTKIKCLFSGQVPVQISRRIITTVSINLRMCPQNSCEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLFLETPRLATEVKVIEFGQVVELVIQGTSLVGGGLD--HPMHLHGFSFYVVGVGFGNYNISEEDPSSRYNLYDPPYKNTMTVPRNGWIAIRFVADNPGVWFMHCHLDRHQTWGMNVVF---IVKNGREPNQQI 553          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC5_ORYSJ (Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 40/120 (33.33%), Postives = 62/120 (51.67%), Query Frame = -3
Query:  126 VYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALGVETVGNIPNQAL 482
            V  L  NT+V+++LQ  +      +E HP H+HG +F+V+G G G +   ++              V  P G W A+RF+ADNPG W  HCH + HL  G+ +   +     G +P+Q +
Sbjct:  424 VVPLAFNTSVELVLQGTSI---QGAESHPLHMHGFNFFVVGQGFGNYDPVNDPANYNLVDPVERNTVSVPTGGWVAVRFLADNPGVWLMHCHFDVHLSWGLSMAWLV---NDGPLPSQKM 537          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC16_ORYSJ (Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 50/166 (30.12%), Postives = 75/166 (45.18%), Query Frame = -3
Query:  174 AINNVSLTLPPTPYLGSIKHGL-KDAFDQNGPPENFSNEYDVMKPPVNAN------TTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHLHMGMGVV 647
            ++NNVS   P    L +  +G  +  ++++ P    +   +    P   N      T  G+ V ++   T V+V+ Q+ +      SE HP HLHG  F+V+G G G F +  +              V  P   W A+RF ADNPG W  HCH + H+  GM  V
Sbjct:  289 SLNNVSFESPAIDVLDAYYYGSGRGVYEEDFP----NKPVNAFVNPTGDNGGRPLLTKRGTKVKVVEYGTVVEVVFQDLS------SENHPMHLHGFAFYVVGRGSGTFDERRDPATYNLVDPPFQNTVSVPKSSWAAIRFRADNPGVWFMHCHFDRHVVWGMDTV 444          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: FET3_KLULA (Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis GN=FET3 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.558e-13
Identity = 60/193 (31.09%), Postives = 81/193 (41.97%), Query Frame = -3
Query:  126 NTINGFTKWAINNVSLTLPPTPYLGSIKHGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVL----GY----GEGK--FTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALGVETVGNIPNQAL 674
            N  NG      NN++ T P  P L +     KDA                + P V    T     ++L  +  ++++L N +  K      HP+HLHGH F ++    GY    GEG   F  ED             T  + P     LRF ADNPG W FHCHIE HL  G+ ++L    E + N  +Q L
Sbjct:  352 NLKNGVNYAFFNNLTFTAPKVPTLMTALSAGKDA----------------LNPLVYGTNT---NAFVLKKDEIIEIVLNNNDTGK------HPFHLHGHIFQLVDRERGYDDAIGEGPHPFDPEDHNPFPDYPMMRD-TVYVNPQSSIVLRFKADNPGVWFFHCHIEWHLKQGLALLLIEAPEEMQNTESQQL 518          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSJ (Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.565e-13
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = -3
Query:  183 NTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGM 464
            N +V+++ Q+   ++   S+ +P HLHG+D +VL  G G F  K D            NT  +   GW A+RF+ADNPG W  HCH E H+ MGM
Sbjct:  470 NASVEIVFQSTTLLQ---SDSNPMHLHGYDVFVLAQGLGNFDPKRDVEKFNYHNPQLRNTVQVPRGGWAAVRFLADNPGMWYLHCHFEFHIIMGM 561          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: FIO1_SCHPO (Iron transport multicopper oxidase fio1 OS=Schizosaccharomyces pombe GN=fio1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12
Identity = 44/120 (36.67%), Postives = 58/120 (48.33%), Query Frame = -3
Query:  135 SGVYMLGLNTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGK--FTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGMGVVLALGVETVGNIPN 488
            +  Y+      VDVI+ N +  K      HP+HLHGH F VL  GE       + E           +T  I P  +  +RF+ADNPGAW  HCHIE H+  G+   LA  +E    IP+
Sbjct:  394 TNAYIFEYGDVVDVIIDNHDTGK------HPFHLHGHTFQVLERGEENAGLYSDQESHTYYDNPMRRDTVEIEPGSFIVIRFIADNPGAWVIHCHIEWHMESGL---LATFIEAPEMIPS 504          
BLAST of CX043822 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSI (Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = -3
Query:  183 NTTVDVILQNANAIKPNVSEIHPWHLHGHDFWVLGYGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHLHMGM 464
            N +V+++ Q+   ++   S+ +P HLHG+D +VL  G G F  K D            NT  +   GW A+RF+ DNPG W  HCH E H+ MGM
Sbjct:  470 NASVEIVFQSTTLLQ---SDSNPMHLHGYDVFVLAQGLGNFDPKRDVEKFNYHNPQLRNTVQVPRGGWAAVRFLTDNPGMWYLHCHFEFHIIMGM 561          
The following BLAST results are available for this feature:
BLAST of CX043822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
LAC1_ORYSJ2.662e-1432.52Putative laccase-1 OS=Oryza sativa subsp. japonica... [more]
LAC19_ORYSJ3.477e-1433.33Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC19_ORYSI3.477e-1433.33Putative laccase-19 OS=Oryza sativa subsp. indica ... [more]
LAC15_ARATH3.477e-1426.89Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV... [more]
LAC5_ORYSJ1.321e-1333.33Putative laccase-5 OS=Oryza sativa subsp. japonica... [more]
LAC16_ORYSJ1.726e-1330.12Putative laccase-16 OS=Oryza sativa subsp. japonic... [more]
FET3_KLULA6.558e-1331.09Iron transport multicopper oxidase FET3 OS=Kluyver... [more]
LAC18_ORYSJ8.565e-1340.00Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
FIO1_SCHPO1.461e-1236.67Iron transport multicopper oxidase fio1 OS=Schizos... [more]
LAC18_ORYSI2.492e-1238.95Putative laccase-18 OS=Oryza sativa subsp. indica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13F06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13F06-L11-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043822 ID=CX043822; Name=CX043822; organism=Citrus sinensis; type=EST; length=799bp
CGAAATTTTATTAATATAAATATCAAAACAACAATAGAAACTCTAGGAAT
AAAGTACATAAAACAAACTAGCTAGCCTCAATTTTGTTTAGGGTTCATGA
ACCTTTTCCCAGTCAAACCACAAGCCAACGCCTGGTTTGGAATATTACCA
ACGGTTTCAACACCAAGAGCAAGAACCACACCCATTCCCATATGCAAATG
GGGCTCAATATGGCAGTGAAATGCCCAAGCACCTGGATTATCAGCAACAA
ATCTTAAAGCAGTCCAGCCATATGGGAATATCACCGCAGTATTTTTCAAT
GGTGGATTCTTCAAGTTAAATTTCTTCTCATCTTCTTTCGTAAACTTCCC
TTCTCCGTACCCTAATACCCAAAAATCATGCCCATGCAAATGCCAAGGGT
GGATTTCACTCACGTTTGGCTTTATCGCGTTTGCATTTTGAAGTATAACA
TCAACTGTGGTGTTTAAACCAAGCATGTAAACCCCACTTCCAAGAGTTGT
ATTAGCGTTTACTGGAGGTTTCATCACGTCATACTCATTCGAGAAGTTTT
CGGGGGGACCATTCTGATCAAAAGCATCTTTAAGACCATGTTTGATGGAT
CCTAAGTAAGGAGTGGGGGGTAAAGTCAGGGACACATTGTTAATAGCCCA
CTTAGTGAACCCGTTAATGGTGTTTTGAGTGTTAAGAAGGGTGAGCCGAC
GGTGGAAATTTGTGGGAGGCTTGGGGGATCCCATTAGGGCAAATATTTTG
TTGGAGAATGATTTGCTGTGATCATAGTCGTCCCATCTAGGAGTTATAG
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