CX043821

Overview
NameCX043821
Unique NameCX043821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559
            D +FA+LY+ KWTSL+IPP T+++VNL+ I  G S  I S    W  L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A   SLLWV ++P
Sbjct: 1032 DDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          

HSP 2 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 31/81 (38.27%), Postives = 56/81 (69.14%), Query Frame = 1
Query:   25 NGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            + ++K+L+R+AY+N  +YP TSI LI YC LPA  L + +FI+  ++    ++ +++ I++    +LEI+WSG+ +E+ WR
Sbjct:  908 SSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWR 988          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559
            D +FA+LYV KW+ L++PP T+++VN++ I  G++  + S +  W  L G +FF+ WV+ HLYPF KGL+GR+ R PTIV VWS LL+ I SLLWV ++P
Sbjct: 1069 DDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINP 1168          

HSP 2 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            R+K L+R+AY N  +YP TS+ LI YC LPA  L + +FI+  +     ++ + + +++    +LEI+WSG+ + + WR
Sbjct:  946 RMKFLQRVAYFNVGMYPFTSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWR 1024          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559
            D  FA+LY+ KWT L I P T++IVNLV IV G S  I S    WG L G +FF++WV+ H+YPF KGL+GR+ + PTIV VWS L++   SLLW+ + P
Sbjct:  925 DDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024          

HSP 2 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            RLK L+R+AY+N  +YP TSI L+ YC LPA CL + KFI+  +      + + + +++    +LE++WSG+G+E+ WR
Sbjct:  803 RLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWR 881          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 2
Query:  236 GVGLVLRTDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559
            GVG     D  FAELY  +W+ L++PP T+++VN V I    +  + S +  W  L G  FF+ WV+ HLYPF KGLLGR+ R PTIV VWS L++ I SLLWV ++P
Sbjct: 1092 GVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199          

HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 32/79 (40.51%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            R+KLL+R+AY N  +YP TS+ L+AYC LPA  L + KFI+  +S     + +++ +++    +LEI+WSG+ + + WR
Sbjct:  968 RMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWR 1046          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 583
            D  FAELY+ KWTSL IPP  V+ +N++ +V GVS  + +    +  L G  FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++   SLLW+ + P   DD+ A
Sbjct:  901 DDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006          

HSP 2 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            RLK L+R+AY+N  +YP TS+ LI YC LPA  L + +FI+  +      + +L+ I++    +LE++WSG+G+E+ WR
Sbjct:  779 RLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWR 857          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 583
            D  FAELY+ KWTSL IPP  V+ +N++ +V GVS  + +    +  L G  FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++   SLLW+ + P   DD+ A
Sbjct:  901 DDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006          

HSP 2 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            RLK L+R+AY+N  +YP TS+ LI YC LPA  L + +FI+  +      + +L+ I++    +LE++WSG+G+E+ WR
Sbjct:  779 RLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWR 857          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 2
Query:  269 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG 595
            +A+LY+ KW+SLLIPP T+ +VN++ I    +  I S    WG   G  FF+ WV+AHL PF KGL+GR+ +TPTIV VWS LL+   SLLWV + P      +ANSNG
Sbjct: 1034 YADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP-----PEANSNG 1137          

HSP 2 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 32/79 (40.51%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            +L LL+R++Y+N  +YP TSI L+ YC +PA  L +  FI+ ++      + + + I++ A GILE++WSG+ +ED WR
Sbjct:  909 KLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWR 987          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 553
            D +FA+LY+FKWT+L+IPP T++I+N+V I+  V   + S    W  L G  FFA WV+ H+YPF KGL+GR  +TPT+V VWS L+A   SLL++ +
Sbjct:  869 DDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966          

HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 28/79 (35.44%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            +LKLL+R+AY+N  +YP TSI ++ YC LP   L +  F++  ++    ++ +++ +S+    +LE++WSG+ +E+ WR
Sbjct:  745 KLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWR 823          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 2
Query:  290 KWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY-QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRT-PTIVIVWSILLASIFSLLWVRVDPFTS 568
            +WT+LL+ PT+V++ NL G+VA V++ ++ GY QSWG L  KL  A WV+AHL  FL+GLL  ++R  PTI ++WS++  S+ SLLWV    F++
Sbjct:  754 RWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASFSA 848          

HSP 2 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIP-EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            H P+W G   RL LL+RL Y+    YPL S+PL  YC LPA CLLT K   P ++S +  +  ILL  S+ A+  LE+RWS V +   WR
Sbjct:  603 HSPVWAGR--RLGLLQRLGYVARASYPLASLPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWR 690          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 34/95 (35.79%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  269 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 553
            +A+LYV +WT L+I P  +++VN++G     +  ++  +  W  + G +FF  WV+ HLYPF KG+LG+  +TP +V+VW      I ++L++ +
Sbjct:  824 YADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINI 918          
The following BLAST results are available for this feature:
BLAST of CX043821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CSLD2_ARATH1.163e-2857.00Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD5_ARATH4.888e-2751.00Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD1_ARATH3.168e-2653.00Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD4_ORYSJ1.572e-2549.07Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLD5_ORYSJ1.331e-2449.07Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI1.331e-2449.07Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD3_ORYSJ1.331e-2450.46Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD6_ARATH2.270e-2450.00Putative cellulose synthase-like protein D6 OS=Ara... [more]
CESAB_ORYSJ1.523e-2048.42Putative cellulose synthase A catalytic subunit 11... [more]
CSLF6_ORYSJ1.742e-1635.79Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13F05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13F05-L9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043821 ID=CX043821; Name=CX043821; organism=Citrus sinensis; type=EST; length=698bp
CATTGCCCTATATGGTATGGCTACAATGGGAGATTGAAGCTTTTGGAGAG
ACTGGCGTACATTAACACTATTGTCTACCCACTGACCTCCATCCCACTAA
TTGCTTACTGCACGCTTCCTGCTTTTTGCCTTCTTACTAATAAATTCATC
ATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTTATTCTACTTTTCAT
TTCCATTTTTGCTACTGGAATACTGGAGATTAGATGGAGTGGGGTTGGTA
TTGAGGACTGATGGAGATTTTGCAGAGCTTTATGTATTCAAATGGACATC
TCTTCTCATCCCTCCAACTACAGTCCTGATTGTGAACTTGGTGGGTATTG
TAGCTGGTGTATCATGGGCCATAAACAGTGGTTACCAATCATGGGGTCCA
CTCTTTGGCAAGCTATTCTTTGCCATATGGGTCATTGCCCATCTGTATCC
TTTCCTGAAGGGTCTGTTGGGTCGTCAAAACCGCACACCAACAATTGTCA
TTGTGTGGTCTATCCTACTTGCTTCCATTTTCTCCTTGCTGTGGGTGCGT
GTTGATCCCTTTACCTCTGATGACACCAAAGCCAATTCAAACGGTCAATG
TGGCATCAATTGCTAGTGCATGTTGGATGATTATTTGTGGCTTCAAATGC
CATTCTTCCTTCAAGCTCTCATCAGTGTATATAAGAAGAAATTATGTC
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