CX043821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559 D +FA+LY+ KWTSL+IPP T+++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1032 DDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131 HSP 2 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 31/81 (38.27%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 25 NGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 + ++K+L+R+AY+N +YP TSI LI YC LPA L + +FI+ ++ ++ +++ I++ +LEI+WSG+ +E+ WR Sbjct: 908 SSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWR 988
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559 D +FA+LYV KW+ L++PP T+++VN++ I G++ + S + W L G +FF+ WV+ HLYPF KGL+GR+ R PTIV VWS LL+ I SLLWV ++P Sbjct: 1069 DDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINP 1168 HSP 2 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 R+K L+R+AY N +YP TS+ LI YC LPA L + +FI+ + ++ + + +++ +LEI+WSG+ + + WR Sbjct: 946 RMKFLQRVAYFNVGMYPFTSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWR 1024
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559 D FA+LY+ KWT L I P T++IVNLV IV G S I S WG L G +FF++WV+ H+YPF KGL+GR+ + PTIV VWS L++ SLLW+ + P Sbjct: 925 DDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024 HSP 2 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 RLK L+R+AY+N +YP TSI L+ YC LPA CL + KFI+ + + + + +++ +LE++WSG+G+E+ WR Sbjct: 803 RLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWR 881
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25 Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 236 GVGLVLRTDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 559 GVG D FAELY +W+ L++PP T+++VN V I + + S + W L G FF+ WV+ HLYPF KGLLGR+ R PTIV VWS L++ I SLLWV ++P Sbjct: 1092 GVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199 HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 32/79 (40.51%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 R+KLL+R+AY N +YP TS+ L+AYC LPA L + KFI+ +S + +++ +++ +LEI+WSG+ + + WR Sbjct: 968 RMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWR 1046
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 583 D FAELY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 901 DDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006 HSP 2 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 RLK L+R+AY+N +YP TS+ LI YC LPA L + +FI+ + + +L+ I++ +LE++WSG+G+E+ WR Sbjct: 779 RLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWR 857
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 583 D FAELY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 901 DDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006 HSP 2 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 RLK L+R+AY+N +YP TS+ LI YC LPA L + +FI+ + + +L+ I++ +LE++WSG+G+E+ WR Sbjct: 779 RLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWR 857
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 269 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG 595 +A+LY+ KW+SLLIPP T+ +VN++ I + I S WG G FF+ WV+AHL PF KGL+GR+ +TPTIV VWS LL+ SLLWV + P +ANSNG Sbjct: 1034 YADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP-----PEANSNG 1137 HSP 2 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 32/79 (40.51%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 +L LL+R++Y+N +YP TSI L+ YC +PA L + FI+ ++ + + + I++ A GILE++WSG+ +ED WR Sbjct: 909 KLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWR 987
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24 Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 553 D +FA+LY+FKWT+L+IPP T++I+N+V I+ V + S W L G FFA WV+ H+YPF KGL+GR +TPT+V VWS L+A SLL++ + Sbjct: 869 DDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966 HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 28/79 (35.44%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 +LKLL+R+AY+N +YP TSI ++ YC LP L + F++ ++ ++ +++ +S+ +LE++WSG+ +E+ WR Sbjct: 745 KLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWR 823
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 290 KWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY-QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRT-PTIVIVWSILLASIFSLLWVRVDPFTS 568 +WT+LL+ PT+V++ NL G+VA V++ ++ GY QSWG L KL A WV+AHL FL+GLL ++R PTI ++WS++ S+ SLLWV F++ Sbjct: 754 RWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASFSA 848 HSP 2 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIP-EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 H P+W G RL LL+RL Y+ YPL S+PL YC LPA CLLT K P ++S + + ILL S+ A+ LE+RWS V + WR Sbjct: 603 HSPVWAGR--RLGLLQRLGYVARASYPLASLPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWR 690
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 34/95 (35.79%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 269 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 553 +A+LYV +WT L+I P +++VN++G + ++ + W + G +FF WV+ HLYPF KG+LG+ +TP +V+VW I ++L++ + Sbjct: 824 YADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINI 918 The following BLAST results are available for this feature:
BLAST of CX043821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043821 ID=CX043821; Name=CX043821; organism=Citrus sinensis; type=EST; length=698bpback to top |