CX043820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.442e-47 Identity = 78/118 (66.10%), Postives = 100/118 (84.75%), Query Frame = -2 Query: 377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730 DG+F+ELY+FKWTSLLIPPTT+LI+N++G++ G+S AI++GY SWGPLFG+LFFA WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF + CG++C Sbjct: 953 DGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAKGGPILE--ICGLDC 1068 HSP 2 Score: 35.8094 bits (81), Expect = 1.442e-47 Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = -1 Query: 723 LFISIFATGILEIRWSGVGIED*WR 797 LF SI TGILE++W VGI+D WR Sbjct: 888 LFGSIAVTGILEMQWGKVGIDDWWR 912
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 7.068e-47 Identity = 77/118 (65.25%), Postives = 100/118 (84.75%), Query Frame = -2 Query: 377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730 DG+F++LY+FKWTSLLIPP T+LI+N++G++ GVS AI++GY SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF + CG++C Sbjct: 968 DGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAKGGPILE--ICGLDC 1083 HSP 2 Score: 36.1946 bits (82), Expect = 7.068e-47 Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = -1 Query: 723 LFISIFATGILEIRWSGVGIED*WR 797 LF SI TGILE++W VGI+D WR Sbjct: 903 LFSSIAITGILEMQWGKVGIDDWWR 927
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.876e-46 Identity = 84/116 (72.41%), Postives = 101/116 (87.07%), Query Frame = -2 Query: 377 DFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 724 +F +LY+FKWT+LLIPPTT++I+N+VG+VAGVS AIN+GY SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVR+DPF T QCG++C Sbjct: 935 EFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLK-QCGVDC 1049
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.486e-45 Identity = 82/115 (71.30%), Postives = 99/115 (86.09%), Query Frame = -2 Query: 377 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 721 F ELY+FKWT+LL+PPTT++I+N+VGIVAGVS A+N+GY SWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVR+DPF K CG++C Sbjct: 950 FGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFI-PKPKGPVLKPCGVSC 1063
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.998e-29 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 386 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 730 D +FAELY KWTSL+IPP T++++NLV I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLW+ + P A +N Q G Sbjct: 1012 DDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP-----PSAQANSQLG 1121
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.998e-29 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 386 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 730 D +FAELY KWTSL+IPP T++++NLV I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLW+ + P A +N Q G Sbjct: 1012 DDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP-----PSAQANSQLG 1121
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = -2 Query: 431 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 730 D +FA+LY+ KWTSL+IPP T+++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1032 DDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29 Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = -2 Query: 431 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 730 D +FA+LY+ KWTSL+IPP +++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS LLA SLLWV ++P Sbjct: 1057 DDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29 Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = -2 Query: 431 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 730 D +FA+LY+ KWTSL+IPP +++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS LLA SLLWV ++P Sbjct: 1057 DDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = -2 Query: 431 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 730 D +FA+LY+ KWTSL+IPP T+++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1032 DDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131 The following BLAST results are available for this feature:
BLAST of CX043820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043820 ID=CX043820; Name=CX043820; organism=Citrus sinensis; type=EST; length=797bpback to top |