DC900382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP46_YEAST (Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae GN=PRP46 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11 Identity = 49/155 (31.61%), Postives = 67/155 (43.23%), Query Frame = 3 Query: 180 FVLSVAWSP-DGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +V VA P D GS D T V+D+ K L GH M R + S P LFS S D V D E + GH V +V P I T D +KLWD+ R + ++ H + V P+ +VVS S D ++ L++ Sbjct: 141 WVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHP-YLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWD 294
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: Y1491_SYNY3 (Uncharacterized WD repeat-containing protein sll1491 OS=Synechocystis sp. (strain PCC 6803) GN=sll1491 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 43/149 (28.86%), Postives = 72/149 (48.32%), Query Frame = 3 Query: 84 KLWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 530 K WD T+ L+ T F+ +A +PDGR++ G++ +++ AK L + G + + SP + R + +A+ + + I D T + GH WVLS+ SPDG + +G+ D+TVK+WDL+ A Sbjct: 214 KFWDANTFELLGT-------------SPQQPGFINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSP-NNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLSALA 347
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 54/191 (28.27%), Postives = 81/191 (42.41%), Query Frame = 3 Query: 84 KLWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKS------------LXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 620 +LWD T I L I + V ++A SP+ + IA GS+D V+ V+ + LEGH + +SP D +L S S D + + + + +GH +VLSV SPD +GS DR+++ WDL + + H + V V F P G + S S D Sbjct: 427 RLWDVETGQCILKLEI--------------ENGVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSP-DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGD 601
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TBL3_MOUSE (Transducin beta-like protein 3 OS=Mus musculus GN=Tbl3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 43/162 (26.54%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 156 TDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 T + K + S+A SP+ + +A GS D T ++ + + + L GH + +SP D +VL +AS D + + + S GH VL V G+ + + SD +KLW + ++++ H D+VWG+ L ++ D I L++ Sbjct: 473 TTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTD-QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWK 633
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 43/153 (28.10%), Postives = 69/153 (45.10%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 V V SP A GS D T ++ R L GH + + P + L + S D V + A+ + +GH VLS+ SP+G + + D+ +KLWDL + + HTD + ++F P G + S S D S+ +++ Sbjct: 387 VWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 177 KFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLW 512 K V SV +SP+G +A G D ++D+ K L+ + H + Y P + L +AS D V+I SL +++GH V S+D + D + I T S DRT+KLW Sbjct: 424 KPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: LIS1_MACFA (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 38/120 (31.67%), Postives = 59/120 (49.17%), Query Frame = 3 Query: 282 HXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 + L GH P +++ PV V+ SAS D + + D E + GH V + G +T+ S+D T+KLWD +++M H V V+ P G +VS S DK+I ++E Sbjct: 102 YALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWE 220
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11 Identity = 41/153 (26.80%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 V ++ S DGR IA S D T ++D + + + L GH ++P R L S S D + I + + + + GH +L + G + + ++D VK+W L+ + ++ NH D+VW ++ R G +VS D +S+++ Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFS-RQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWK 619
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11 Identity = 39/155 (25.16%), Postives = 75/155 (48.39%), Query Frame = 3 Query: 177 KFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 K + S +SP G+ + S D T ++++ L GH + + +S D R + SAS D + I + + + GH +V + +P + + +GS D +V++WD+ ++++ H+D V VSF G + S S D + +++ Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS-DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TBL3_HUMAN (Transducin beta-like protein 3 OS=Homo sapiens GN=TBL3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11 Identity = 43/162 (26.54%), Postives = 77/162 (47.53%), Query Frame = 3 Query: 156 TDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 T + K + SVA +P+ + +A GS D T ++ + + + L GH + +SP+D +VL +AS D + + + S GH VL V G + + SD VKLW + ++++ H D+VWG+ L ++ + D + L++ Sbjct: 473 TTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWK 633 The following BLAST results are available for this feature:
BLAST of DC900382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900382 ID=DC900382; Name=DC900382; organism=Citrus sinensis; type=EST; length=905bpback to top |