DC900382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP46_KLULA (Pre-mRNA-splicing factor PRP46 OS=Kluyveromyces lactis GN=PRP46 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12 Identity = 44/145 (30.34%), Postives = 65/145 (44.83%), Query Frame = 3 Query: 207 DGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 D A GS D T ++D+ K L GH M R + S P +FSAS D V D E + GH V +VD P I T D V+LWD+ R+ + + H + V P+ +++S S D ++ L++ Sbjct: 134 DNEWFATGSNDTTIKIWDLAAGKLKITLIGHVMSVRDIAISKRHP-YMFSASEDKLVKCWDLERNTAIRDFHGHLSGVHTVDVHPSLDIIATAGRDAVVRLWDIRSRSEIMVLPGHKSPINKVKCLPVDPQIISCSGDATVRLWD 277
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBB3_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Homo sapiens GN=GNB3 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12 Identity = 48/192 (25.00%), Postives = 83/192 (43.23%), Query Frame = 3 Query: 87 LWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFD-------VTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +WD+ T N + + + +V++ A++P G +ACG +D S+++ V ++ L G+ R L D + ++S DT + D E T GH +S+ SPD +G+ D + KLWD+ Q+ T H + + F P G + + SDD S L++ Sbjct: 81 VWDSYTTNKVHAIPLR-------------SSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFL-----DDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFD 254
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: WDR3_HUMAN (WD repeat-containing protein 3 OS=Homo sapiens GN=WDR3 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 46/165 (27.88%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 147 LKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +K T + VL V++SP+ + +A +D T +F V KF L GH +P + S D ++ + S D +V I + ++ H V+ + P T D +K WD + +Q++ H ++W ++ P G VVS S DKS+ L+E Sbjct: 540 VKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH-DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TUP1_KLULA (General transcriptional corepressor TUP1 OS=Kluyveromyces lactis GN=TUP1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 168 SSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASP-DGAAITTGSSDRTVKLWDLNMRAAMQSM-------TNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 SS ++ SV +SPDG+ +A G+ D ++D+ K + L+GH L Y P + L S S D V I D + +S V +V SP +G I GS DRTV++WD + ++ + T H D V+ V F G VVS S D+S+ L+ Sbjct: 404 SSDLYIRSVCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNK-LVSGSGDRTVRIWDLTTGTCSLTLS-IEDGVTTVAVSPGEGKFIAAGSLDRTVRVWDSDTGFLVERLDSENELGTGHRDSVYSVVFTRDGKGVVSGSLDRSVKLW 566
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PFS2_EMENI (Polyadenylation factor subunit 2 OS=Emericella nidulans GN=pfs2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 49/195 (25.13%), Postives = 83/195 (42.56%), Query Frame = 3 Query: 171 SKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLE-------------------GHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS***GIFKVRLLQSFCLL 698 SKK + V W+P+GRR+ G G +++ T F ++ H R L +SP D + L SAS DT + I D ++ T ++GH V S D P + +GS D VK WD + ++ +H + V F + +++ S + +F +R+++ C+L Sbjct: 93 SKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDKGDVKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFL-SASDDTTLKIYDFTARTCDTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTARCLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTA--------RVFDLRMMRDICIL 278
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 37/117 (31.62%), Postives = 54/117 (46.15%), Query Frame = 3 Query: 291 EGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +GH + L P P +L +AS D + G L GH WV VD P G + +G D VK+WD + + + T+H +W V F LG V S S D ++ L++ Sbjct: 323 KGHLLSVANLALHPTKP-ILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLWD 438
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: NLE1_ARATH (Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 174 KKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLW 512 ++ V V +SPDG+ IA S D + +++ +F+ GH P + +S D R+L S S D+ + I + K L + GHA V +VD SPDG + +G DR +KLW Sbjct: 360 QQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWS-ADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 46/153 (30.07%), Postives = 69/153 (45.10%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 V SV ++ I GS G+ ++D+ AK L L GH L + P V S S DT++ + D K GH V + SPDG + + S D +VKLWDL M ++ H V + F P + S S D+++ ++ Sbjct: 66 VESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVA-SGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWD 217 HSP 2 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 40/144 (27.78%), Postives = 67/144 (46.53%), Query Frame = 3 Query: 210 GRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 GR +A G D ++ V + + L GH P + ++ + ++ + S + I D E + + GH V S+D P G + +GS D +KLWD+ + + HT V + F P G + S SDD S+ L++ Sbjct: 33 GRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSE-ELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWD 175
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBB1_HOMAM (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Homarus americanus GN=GBETA1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 46/189 (24.34%), Postives = 82/189 (43.39%), Query Frame = 3 Query: 87 LWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVT----RAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +WD+ T N + + + +V++ A++P G +ACG +D S++ + + L GH + VD + ++S D + D E T +GH V+S+ SP+ T+G+ D + KLWD+ Q+ H + V+F P G + SDD + L++ Sbjct: 81 VWDSYTTNKVHAIPLR-------------SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--VDDNQIVTSSGDMTCALWDIETGQQCTQFTGHTGDVMSLSLSPNMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVTFFPNGHAFATGSDDATCRLFD 254
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: WDR69_HUMAN (WD repeat-containing protein 69 OS=Homo sapiens GN=WDR69 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12 Identity = 40/152 (26.32%), Postives = 72/152 (47.37%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 + S +++ D I GSMD T ++D T K + L GH + +++ +AS D I A + + GH + + +P G + TGSSD+T ++WD +Q + HTD+++ +F G V++ S D + ++ Sbjct: 264 ISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTG-KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414 HSP 2 Score: 70.8626 bits (172), Expect = 1.163e-11 Identity = 50/187 (26.74%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 84 KLWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWS-PDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 KLWDTA+ + TL + V ++A++ P G +IA GS D T ++ V K H GH L ++P V + S DT + D + + GH+ ++S+ + G I TGS D TV +WD + + + H ++ SF +++ S DK+ L++ Sbjct: 117 KLWDTASGEELNTLE-------------GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVA-TGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD 289 HSP 3 Score: 69.3218 bits (168), Expect = 3.384e-11 Identity = 39/152 (25.66%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 ++ ++++P +A GSMD T ++D+ + ++ L GH L ++ R++ + S D V + DA+ + GH + S + D + I TGS D+T KLWD + ++T H D++ F G + + S D + ++ Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330 The following BLAST results are available for this feature:
BLAST of DC900382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900382 ID=DC900382; Name=DC900382; organism=Citrus sinensis; type=EST; length=905bpback to top |