DC900382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11 Identity = 47/158 (29.75%), Postives = 74/158 (46.84%), Query Frame = 3 Query: 210 GRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS***GIFKVRLLQ 683 GR I GS D T V+ LH L+GH R + + +L + S DT + + D E + GH V V DG + +G D TVK+W+ + ++++T H ++V+ + F V S S D SI +++++ G V LLQ Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG---SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PFS2_ASPFU (Polyadenylation factor subunit 2 OS=Aspergillus fumigatus GN=pfs2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11 Identity = 49/199 (24.62%), Postives = 83/199 (41.71%), Query Frame = 3 Query: 171 SKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLE-----------------------GHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS***GIFKVRLLQSFCLL 698 SKK + V W+P+GRR+ G G +++ T F ++ H R L +SP D + L SAS DT + I D ++ T ++GH V S D P + +GS D VK WD + ++ +H + V F + +++ S + +F +R+++ C+L Sbjct: 27 SKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDVRGQKGDIKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFL-SASDDTTLKIFDFTARTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTARCLTTLHSHKNTVTTTRFSRVNSNLLATSSRDQTA--------RVFDLRMMRDICIL 216
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11 Identity = 48/181 (26.52%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 84 KLWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 626 KLWD + ++TL+ E ++S+ ++ G R+ GS D T ++DV + +H L GH + ++ D ++ +AS D + DAEG + GH VL V + G I T S+D T +++ + + + H ++ V F G RV++ S DK+ Sbjct: 202 KLWDVESGEEVSTLAGHFAE-------------IISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKT 368
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11 Identity = 37/155 (23.87%), Postives = 76/155 (49.03%), Query Frame = 3 Query: 177 KFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 K + +V +SP G+ + S D T +++++ L GH + +S D + + +AS D + I + + + GH +V + +P + + +GS D +V++WD+ ++++ H+D V VSF G + S S D + +++ Sbjct: 80 KSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS-ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBR (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 3 Query: 177 KFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLE--GHFMPXRXLVYSP-VDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 545 K VLSVA+SPD R+I G D V++V + + +H L H + +SP +D V+ S D V + D L T + GH +V SV SPDG+ + D +LWDL A+ M Sbjct: 110 KDVLSVAFSPDNRQIVSGGRDNALRVWNV-KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEM 234
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBB (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 3 Query: 177 KFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLE--GHFMPXRXLVYSP-VDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 545 K VLSVA+SPD R+I G D V++V + + +H L H + +SP +D V+ S D V + D L T + GH +V SV SPDG+ + D +LWDL A+ M Sbjct: 110 KDVLSVAFSPDNRQIVSGGRDNALRVWNV-KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEM 234
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11 Identity = 41/165 (24.85%), Postives = 79/165 (47.88%), Query Frame = 3 Query: 156 TDKXSSKK-FVLSVAWSPDGRRI--ACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 TD+ S + L AW D ++ A G+ D T ++ +++ L LEGH + + P L SAS DT + D GH+ + S+ PDG+ +++G +D ++WDL ++ + H Q+ +++ P G ++ + S D ++ +++ Sbjct: 214 TDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGD-YLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWD 377
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP46_CANGA (Pre-mRNA-splicing factor PRP46 OS=Candida glabrata GN=PRP46 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11 Identity = 44/145 (30.34%), Postives = 64/145 (44.14%), Query Frame = 3 Query: 207 DGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 D A GS D T ++++ K L+ H M R L S P +FS S D V D E + GH V +VD P + T D VK+WD+ R + ++ H + V P+ +V+S S D SI L++ Sbjct: 127 DNEWFATGSNDKTIKIWNLASGKLKVTLKAHDMTVRDLAISNRHP-YMFSVSEDKTVKCWDLEKNTAIRNYHGHLSGVHTVDIHPTVDVVVTAGRDSVVKVWDIRTRLPVMTLPGHKGPITKVRCLPVDPQVISSSVDASIRLWD 270
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11 Identity = 37/120 (30.83%), Postives = 58/120 (48.33%), Query Frame = 3 Query: 282 HXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 + L GH P +++ PV V+ SAS D + + D E + GH V + G + + S+D T+KLWD +++M H V V+ P G +VS S DK+I ++E Sbjct: 102 YALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: LIS1_PANTR (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11 Identity = 37/120 (30.83%), Postives = 58/120 (48.33%), Query Frame = 3 Query: 282 HXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 + L GH P +++ PV V+ SAS D + + D E + GH V + G + + S+D T+KLWD +++M H V V+ P G +VS S DK+I ++E Sbjct: 102 YALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 The following BLAST results are available for this feature:
BLAST of DC900382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900382 ID=DC900382; Name=DC900382; organism=Citrus sinensis; type=EST; length=905bpback to top |