DC900382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 120 TLSIXRP-EGLKPTDKXSSKKFVLS-VAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLW 512 TL + P E KP + + + +++ V +SPD R +A S D + ++D K+L L GH + +S D R+L S S D+ + + D + + L + GHA V +VD SPDG + +G D+ +++W Sbjct: 352 TLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 216 RIACGSMDGTXSVFDVTRAKF-LHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 R+ GS D T ++ K L + GH +++SP D R++ SAS D + + D ++ GH V + S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK + ++ Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP-DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 120 TLSIXRP-EGLKPTDKXSSKKFVLS-VAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLW 512 TL + P E KP + + + +++ V +SPD R +A S D + ++D K+L L GH + +S D R+L S S D+ + + D + + L + GHA V +VD SPDG + +G D+ +++W Sbjct: 352 TLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 71.633 bits (174), Expect = 6.818e-12 Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 216 RIACGSMDGTXSVFDVTRAKF-LHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 R+ GS D T ++ K L + GH +++SP D R++ SAS D + + D ++ GH V + S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK + ++ Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP-DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 50/153 (32.68%), Postives = 68/153 (44.44%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 V SV + I GS G+ V+D+ AK L L GH L + P V S S DT++ + D K GH+ V + SPDG + + + D TVKLWDL M HT V V F P + S S D++I ++ Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 50/153 (32.68%), Postives = 68/153 (44.44%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 V SV + I GS G+ V+D+ AK L L GH L + P V S S DT++ + D K GH+ V + SPDG + + + D TVKLWDL M HT V V F P + S S D++I ++ Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBB1_CRIGR (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Cricetulus griseus GN=GNB1 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 44/189 (23.28%), Postives = 83/189 (43.92%), Query Frame = 3 Query: 87 LWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVT----RAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +WD+ T N + + + +V++ A++P G +ACG +D S++++ + L GH + ++ + ++S DT + D E T +GH V+S+ +PD +G+ D + KLWD+ Q+ T H + + F P G + SDD + L++ Sbjct: 81 IWDSYTTNKVHAIPLR-------------SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LNDNQIVTSSEDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBB1_CAEEL (Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis elegans GN=gpb-1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12 Identity = 46/189 (24.34%), Postives = 82/189 (43.39%), Query Frame = 3 Query: 87 LWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVT----RAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +WD+ T N + + + +V++ A++P G +ACG +D S++ + + L GH + +D + ++S D + D E TA +GH V+S+ SPD +G+ D + KLWD+ Q+ H + V+F P G + SDD + L++ Sbjct: 81 VWDSYTTNKVHAIPLR-------------SSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFD 254
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: GBB1_CAEBR (Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis briggsae GN=gpb-1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12 Identity = 46/189 (24.34%), Postives = 82/189 (43.39%), Query Frame = 3 Query: 87 LWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVT----RAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +WD+ T N + + + +V++ A++P G +ACG +D S++ + + L GH + +D + ++S D + D E TA +GH V+S+ SPD +G+ D + KLWD+ Q+ H + V+F P G + SDD + L++ Sbjct: 81 VWDSYTTNKVHAIPLR-------------SSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFD 254
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: WDR3_MOUSE (WD repeat-containing protein 3 OS=Mus musculus GN=Wdr3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12 Identity = 47/165 (28.48%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 147 LKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +K T + VL V++SP+ + +A +D T VF V KF L GH +P + S D ++ + S D +V I + ++ H V+ + P T D +K WD + +Q++ H ++W ++ P G VVS S DKS+ L+E Sbjct: 539 VKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISH-DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: YCW2_YEAST (WD repeat-containing protein YCR072C OS=Saccharomyces cerevisiae GN=YCR072C PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 3 Query: 174 KKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLW 512 +K V VA+SPDGR I S D + ++D KF+ GH + +S D R+L S S DT + + D + L + GH V +VD S DG + +G D+ V+LW Sbjct: 402 QKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSS-DCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: UTP12_YEAST (U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces cerevisiae GN=DIP2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12 Identity = 45/153 (29.41%), Postives = 72/153 (47.06%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +L V SPD R +A +D T VF + KF L GH +P + S D +++ ++S D ++ I + ++ H +++V P + S D VK WD +Q + H +VW ++ GG VVS S D SI ++E Sbjct: 534 ILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDIS-FDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685 The following BLAST results are available for this feature:
BLAST of DC900382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900382 ID=DC900382; Name=DC900382; organism=Citrus sinensis; type=EST; length=905bpback to top |