DC900382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12 Identity = 38/151 (25.17%), Postives = 70/151 (46.36%), Query Frame = 3 Query: 189 SVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +VA + G GS D T ++D + LH LEGH + ++ + + S D + E GH ++ + +P + TGS D T KLWD+ + ++T H+ ++ +SF G R+++ S D +++++E Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247 HSP 2 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 39/152 (25.66%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 + S ++ D I GSMD T ++D K + L GH + +++ +AS D I A + T + GH + + +P G + TGSSD+T ++WD +Q + HTD+++ +F G +++ S D + ++ Sbjct: 264 ISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG-KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414 HSP 3 Score: 68.9366 bits (167), Expect = 4.419e-11 Identity = 48/187 (25.67%), Postives = 84/187 (44.92%), Query Frame = 3 Query: 84 KLWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWS-PDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 KLWDTA+ + TL + V ++A++ P G +IA GS D T ++ V K H GH L ++P V + S DT + D + ++GH+ ++S+ + G I TGS D TV +W+ + + ++ H ++ F +++ S DK+ L++ Sbjct: 117 KLWDTASGEELHTLE-------------GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVA-TGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWD 289 HSP 4 Score: 68.1662 bits (165), Expect = 7.538e-11 Identity = 44/186 (23.66%), Postives = 84/186 (45.16%), Query Frame = 3 Query: 84 KLWDTATWNLIATLSIXRPEGLKPTDKXSSKKFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 KLWD + + TL+ E ++S++++ G RI GS D T +V++ + ++ L GH V++ D ++ + S D + DA ++GH +L G I T S+D T +++ R + + H ++ +SF P G R+++ S DK+ +++ Sbjct: 202 KLWDIQSGEEVFTLTGHSAE-------------IISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP46_CRYNE (Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans GN=PRP46 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12 Identity = 44/154 (28.57%), Postives = 71/154 (46.10%), Query Frame = 3 Query: 180 FVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +V +VA P + A G+ D ++D+ + L GH R L S P LFS + D V D E + GH V S+ P + TG D +V++WD+ RA + ++T HT V V + +++S S D ++ L++ Sbjct: 184 WVRAVAMDPGNQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSDRHP-YLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVRVWDMRTRANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWD 336
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: TBL3_BOVIN (Transducin beta-like protein 3 OS=Bos taurus GN=TBL3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11 Identity = 43/155 (27.74%), Postives = 76/155 (49.03%), Query Frame = 3 Query: 177 KFVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 K + SVA +P+ + +A GS D T ++ + R + L GH + +SP+D +VL +AS D + + + S GH VL V G + + SD +KLW + ++++ H D+VWG+ L R ++ + D + L++ Sbjct: 480 KDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWK 633
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11 Identity = 44/123 (35.77%), Postives = 61/123 (49.59%), Query Frame = 3 Query: 282 HXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWD-LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 647 H L H P L + P +L SAS D V + D E + + GH V+ VD P G + T SSD T+KLWD N ++++ H V V F P G +VS S DK+I +++ S Sbjct: 99 HTLASHRAPVTRLAFHPTWT-LLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVS 220
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11 Identity = 39/144 (27.08%), Postives = 69/144 (47.92%), Query Frame = 3 Query: 210 GRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 GR +A G D +V+ V + + L GH P L S + ++ + S + + D E + + GH + S+D P G+ + +GS D +KLWD+ + + +HT V + F P G + S +DD ++ L++ Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 175 HSP 2 Score: 70.0922 bits (170), Expect = 1.984e-11 Identity = 46/141 (32.62%), Postives = 62/141 (43.97%), Query Frame = 3 Query: 219 IACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 I GS G+ V+D+ AK L L GH L + P V S S DT + + D K H V + SPDG + + + D TVKLWDL M T H+ V V F P + S S D++I ++ Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA-SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWD 217
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: WDR69_MACFA (WD repeat-containing protein 69 OS=Macaca fascicularis GN=WDR69 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 40/152 (26.32%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 183 VLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 + S ++ D I GSMD T ++D T K + L GH + +++ +AS D I A + + GH + + +P G + TGSSD+T ++WD +Q + HTD+++ +F G V++ S D + ++ Sbjct: 264 ISSALFNWDCSLILTGSMDKTCMLWDATNGKCVATLTGHDDEILDSCFDYTG-KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNYKGNIVITGSKDNTCRIW 414
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP46_YARLI (Pre-mRNA-splicing factor PRP46 OS=Yarrowia lipolytica GN=PRP46 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 43/153 (28.10%), Postives = 69/153 (45.10%), Query Frame = 3 Query: 180 FVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 638 +V SV P+ + A GS D T ++D+ K L GH M R L SP P +FS D V D E + GH V S+D P + + D ++WD+ R + ++ H + V F+ +V++ S D+++ L+ Sbjct: 134 WVRSVCVEPENQWFATGSADKTIKIWDLATGKLRLTLTGHIMGVRALGVSPRHP-YMFSGGEDKMVKCWDLETNKVVRHYHGHLSAVYSLDIHPTLDVLVSAGRDAVARVWDIRTRDPVVVLSGHKSTINRVKFQASEPQVITASADETVRLW 285
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PRP46_ASHGO (Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii GN=PRP46 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 44/145 (30.34%), Postives = 67/145 (46.21%), Query Frame = 3 Query: 207 DGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 D A GS D T V+D+ K L+GH M R + S P +FSAS D V D E ++ G V SVD P I + D V++WD+ R+ + ++ H + V P+ ++VS S D ++ L++ Sbjct: 125 DNAWFATGSNDSTIRVWDLATGKLKVTLQGHIMTVRDICISARHP-YMFSASQDKLVKCWDLERNTVVRDFHGTLSGVHSVDLHPSLDLIVSAGRDSVVRVWDIRSRSCVLTLAGHRGPINKVRCLPVDPQIVSCSTDATVKLWD 268
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PLRG1_RAT (Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 42/154 (27.27%), Postives = 71/154 (46.10%), Query Frame = 3 Query: 180 FVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +V +A P + GS D T ++D+ K L GH R ++ S P LFS D V D E + GH V +D P + T S D T ++WD+ +A++ +++ HT+ V V + ++++ S D +I L++ Sbjct: 206 WVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP-YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD 358
BLAST of DC900382 vs. ExPASy Swiss-Prot
Match: PLRG1_MOUSE (Pleiotropic regulator 1 OS=Mus musculus GN=Plrg1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11 Identity = 42/154 (27.27%), Postives = 71/154 (46.10%), Query Frame = 3 Query: 180 FVLSVAWSPDGRRIACGSMDGTXSVFDVTRAKFLHXLEGHFMPXRXLVYSPVDPRVLFSASXDTHVHIXDAEGKSLXTAMSGHAXWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 641 +V +A P + GS D T ++D+ K L GH R ++ S P LFS D V D E + GH V +D P + T S D T ++WD+ +A++ +++ HT+ V V + ++++ S D +I L++ Sbjct: 205 WVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP-YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD 357 The following BLAST results are available for this feature:
BLAST of DC900382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900382 ID=DC900382; Name=DC900382; organism=Citrus sinensis; type=EST; length=905bpback to top |