CX043814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28 Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = -1 Query: 427 GVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTFH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 867 G HP+ F + G I+F WDTAGQEK L+D YYI AI FDVT+R+T +N+ W ++ V N PIV+C NK+D+KNRQ +K++ + KN +Y+EISAK+ +NF PFL+LAR G P+L FV + L P EV D Sbjct: 41 GAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVSNVNLEPTEVNYD 191
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_RABIT (Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 62 WDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.501e-16 Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 499 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 807 WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F + R Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVR 171
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 493 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 825 KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 57 KIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
BLAST of CX043814 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14 Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = -1 Query: 475 GVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE--NIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYN----FEKPFLYLARKLAGDPNL 867 GVE N +I+ WDTAGQEKF + YY CA+I++D+T R +++++ +W D CR ++ VL GNK D++ NRQV + F K L ++E SAK+ N FEK + +KL +P L Sbjct: 58 GVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTD-CRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGL 195 The following BLAST results are available for this feature:
BLAST of CX043814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043814 ID=CX043814; Name=CX043814; organism=Citrus sinensis; type=EST; length=867bpback to top |