Homology
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26_LITLI (60S ribosomal protein L26 OS=Littorina littorea GN=RPL26 PE=2 SV=1)
HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1
Query: 55 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 369
MK+N VSS R KNRK HF APS +RR +MS+P+S +LRQKYN RSMP+RKDDEVQVVRG +KG++ GKVVQVYR+K+V+HIERI REK NG+TV VGI+PSKV+I
Sbjct: 1 MKFNKMVSSDRGKNRKRHFNAPSHMRRKIMSSPMSKELRQKYNCRSMPIRKDDEVQVVRGHFKGQQVGKVVQVYRKKFVVHIERIQREKANGATVYVGIHPSKVLI 106
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26_SCHPO (60S ribosomal protein L26 OS=Schizosaccharomyces pombe GN=rpl26 PE=2 SV=1)
HSP 1 Score: 145.206 bits (365), Expect = 3.134e-34
Identity = 68/106 (64.15%), Postives = 91/106 (85.85%), Query Frame = 1
Query: 55 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 372
MK++ V+SSRRK RKAHF APSSVRR+LMSAPLS +LR++Y +RS+PVR+DD++ V+RG+ KGREGK+ VYR+K+++ IER+TREK NG++ VGI+ SKVVIT
Sbjct: 1 MKFSRDVTSSRRKQRKAHFGAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGKITSVYRKKFLLLIERVTREKANGASAPVGIDASKVVIT 106
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26_CHICK (60S ribosomal protein L26 (Fragment) OS=Gallus gallus GN=RPL26 PE=2 SV=1)
HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 68/90 (75.56%), Postives = 82/90 (91.11%), Query Frame = 1
Query: 106 HFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 372
HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT
Sbjct: 1 HFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 90
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26_DICDI (60S ribosomal protein L26 OS=Dictyostelium discoideum GN=rpl26 PE=3 SV=1)
HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 55 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 372
MK N VSSSRRK+RKAHFTA S RRI MSA LS DLR KYNVRS+P+RKDDEV+VV G K EGKVV YR+K+VIHI+++T K NG+T +G++PS V++T
Sbjct: 1 MKRNTNVSSSRRKSRKAHFTASSGERRIRMSAALSHDLRTKYNVRSLPIRKDDEVRVVCGDNKNHEGKVVACYRKKYVIHIDKLTVTKTNGNTAQIGVSPSNVILT 106
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26_CAEEL (60S ribosomal protein L26 OS=Caenorhabditis elegans GN=rpl-26 PE=2 SV=1)
HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32
Identity = 65/106 (61.32%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 55 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 372
MK NP VSS K+RKAHF APS RR +MSAPL+ +LR K+ +R++P+R DDEV V+RG +KG G+V++ YR+K+VIHI++ITREK NGSTV++GI+PSKV IT
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGNTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAIT 106
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26B_YEAST (60S ribosomal protein L26-B OS=Saccharomyces cerevisiae GN=RPL26B PE=1 SV=2)
HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 58/100 (58.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query: 73 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 372
VSS RRK RKA+FTAPSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+EGK+ VYR K+ + ++++T+EKVNG++V + ++PSK+VIT
Sbjct: 8 VSSDRRKARKAYFTAPSSERRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVIT 107
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL26A_YEAST (60S ribosomal protein L26-A OS=Saccharomyces cerevisiae GN=RPL26A PE=1 SV=3)
HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 58/100 (58.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query: 73 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 372
VSS RRK RKA+FTAPSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+EGK+ VYR K+ + ++++T+EKVNG++V + ++PSK+VIT
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVIT 107
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL24_PYRHO (50S ribosomal protein L24P OS=Pyrococcus horikoshii GN=rpl24p PE=3 SV=2)
HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 55 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 369
MK N S RK RK + AP VR+ +MSAPLS +LR+KY VR++PVR D+V+++RG +KG EGKVV+V +++ I++E +T KVNG+ V I+PS V+I
Sbjct: 1 MKMN---SKQPRKQRKFLYNAPLHVRQKMMSAPLSKELREKYKVRNLPVRVGDKVRIMRGDFKGYEGKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVMI 102
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL24_PYRFU (50S ribosomal protein L24P OS=Pyrococcus furiosus GN=rpl24p PE=3 SV=2)
HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20
Identity = 50/98 (51.02%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 76 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 369
S RK RK + AP VR+ LMSAPLS +LR+KY VR++PVR D+V+++RG YKG EGKVV+V +++ I++E T K NG+ V I+PS V+I
Sbjct: 5 SKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEGKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMI 102
BLAST of DC900380 vs. ExPASy Swiss-Prot
Match:
RL24_PYRKO (50S ribosomal protein L24P OS=Pyrococcus kodakaraensis GN=rpl24p PE=3 SV=1)
HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19
Identity = 46/94 (48.94%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 88 RKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 369
RK RK + AP +R +MSAPLS +LR+KY VR++P+R D+V+V+RG +KG EGKVV+V R++ IH+E +T +K +G+ V ++PS V+I
Sbjct: 9 RKQRKFLYNAPLHLRGKIMSAPLSKELREKYGVRNLPIRVGDKVKVMRGDFKGVEGKVVEVDLRRYRIHVEGVTHKKTDGTEVFYPLHPSNVMI 102
The following BLAST results are available for this feature:
BLAST of DC900380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 56
100 200 300 400 500 600 Expect = 3.35e-36 / Id = 70.75 Expect = 3.13e-34 / Id = 64.15 Expect = 2.25e-32 / Id = 75.56 Expect = 5.00e-32 / Id = 64.15 Expect = 8.54e-32 / Id = 61.32 Expect = 1.36e-29 / Id = 58.00 Expect = 1.36e-29 / Id = 58.00 Expect = 4.39e-20 / Id = 49.52 Expect = 5.74e-20 / Id = 51.02 Expect = 4.86e-19 / Id = 48.94 Sequence RL26_LITLI RL26_SCHPO RL26_CHICK RL26_DICDI RL26_CAEEL RL26B_YEAST RL26A_YEAST RL24_PYRHO RL24_PYRFU RL24_PYRKO
Match Name E-value Identity Description
RL26_LITLI 3.349e-36 70.75 60S ribosomal protein L26 OS=Littorina littorea GN... [more]
RL26_SCHPO 3.134e-34 64.15 60S ribosomal protein L26 OS=Schizosaccharomyces p... [more]
RL26_CHICK 2.246e-32 75.56 60S ribosomal protein L26 (Fragment) OS=Gallus gal... [more]
RL26_DICDI 5.004e-32 64.15 60S ribosomal protein L26 OS=Dictyostelium discoid... [more]
RL26_CAEEL 8.535e-32 61.32 60S ribosomal protein L26 OS=Caenorhabditis elegan... [more]
RL26B_YEAST 1.363e-29 58.00 60S ribosomal protein L26-B OS=Saccharomyces cerev... [more]
RL26A_YEAST 1.363e-29 58.00 60S ribosomal protein L26-A OS=Saccharomyces cerev... [more]
RL24_PYRHO 4.394e-20 49.52 50S ribosomal protein L24P OS=Pyrococcus horikoshi... [more]
RL24_PYRFU 5.738e-20 51.02 50S ribosomal protein L24P OS=Pyrococcus furiosus ... [more]
RL24_PYRKO 4.858e-19 48.94 50S ribosomal protein L24P OS=Pyrococcus kodakarae... [more]
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