DC900378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: PH1_ARATH (Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana GN=PH1 PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 3.063e-64 Identity = 112/144 (77.78%), Postives = 128/144 (88.89%), Query Frame = 1 Query: 76 MENIWRALSGQDPNPEDYTGIEFWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNI-TPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELSTGEYTMYFVADTEKEKEEWINSIGRAIVQHSRSVTESEVVDYDNK 504 ME+IWR +GQDP+ EDY GIEFWSNPERSGWLTKQGDYIKTWRRRWF+LK+GKL WFKD GSTPRGVI VG CLTV+GAED++NKPFAFELS+G YTM+F+AD EKEKEEWINSIGR+IVQHSRSVT+SEV+DYD++ Sbjct: 1 MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKDQAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWINSIGRSIVQHSRSVTDSEVLDYDHR 144
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: Y4775_DICDI (PH domain-containing protein DDB_G0274775 OS=Dictyostelium discoideum GN=DDB_G0274775 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.214e-13 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 118 PEDYTGIEFWSNPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDL-LNKPFAFELSTGEYTMYFVADTEKEKEEWINSIGR 444 PE + + +R GWLTKQG I+TWRRRWF+LK KLF+FK +I G+I + V+ +D K + F + T + Y A+TE + ++W+ SI R Sbjct: 4 PELKVSVSQLAPSDREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSKGDI----EATGLIELEQNSFVKEEKDKDKKKKYMFTVGTSKRVFYIFAETETDMKQWMESIKR 109
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH2_CERAE (Cytohesin-2 OS=Cercopithecus aethiops GN=CYTH2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 151 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL---------------------STGEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R +D KP FEL G + +Y + A T++EK+EWI SI A+ Sbjct: 259 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVDD-PRKPNCFELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAAV 374
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH3_MOUSE (Cytohesin-3 OS=Mus musculus GN=Cyth3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12 Identity = 45/122 (36.89%), Postives = 62/122 (50.82%), Query Frame = 1 Query: 151 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST---------------------GEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R ED KP FEL G + +Y + A + +EKEEW+ SI +I Sbjct: 264 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVED-PRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 379
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH1_HUMAN (Cytohesin-1 OS=Homo sapiens GN=CYTH1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11 Identity = 48/123 (39.02%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 151 NPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL---------------------STGEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R ED KP FEL G +T+Y + A T +EKEEWI I AI Sbjct: 260 NPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVED-SKKPNCFELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIKAAI 376
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH1_CERAE (Cytohesin-1 OS=Cercopithecus aethiops GN=CYTH1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11 Identity = 48/123 (39.02%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 151 NPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL---------------------STGEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R ED KP FEL G +T+Y + A T +EKEEWI I AI Sbjct: 260 NPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVED-SKKPNCFELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIKAAI 376
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH1_RAT (Cytohesin-1 OS=Rattus norvegicus GN=Cyth1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 151 NPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL---------------------STGEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R ED KP FEL G +T+Y + A T +EKE+WI I AI Sbjct: 260 NPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVED-SKKPNCFELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEDWIKCIKAAI 376
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH1_MOUSE (Cytohesin-1 OS=Mus musculus GN=Cyth1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 151 NPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL---------------------STGEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R ED KP FEL G +T+Y + A T +EKE+WI I AI Sbjct: 260 NPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVED-SKKPNCFELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTPEEKEDWIKCIKAAI 376
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH4_HUMAN (Cytohesin-4 OS=Homo sapiens GN=CYTH4 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 151 NPERSGWLTKQGDYIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFELST---------------------GEYTMYFVADTE-KEKEEWINSIGRAIVQ 456 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L+V+ +D KPF EL G++ Y ++ T +E+++WI SI +I + Sbjct: 259 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE----FTTDKEPRGIIPLEN-LSVQKVDD-PKKPFCLELYNPSCRGQKIKACKTDGDGRVVEGKHESYRISATSAEERDQWIESIRASITR 376
BLAST of DC900378 vs. ExPASy Swiss-Prot
Match: CYH2_RAT (Cytohesin-2 OS=Rattus norvegicus GN=Cyth2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 151 NPERSGWLTKQGD-YIKTWRRRWFILKQGKLFWFKDSHNITPGSTPRGVIPVGTCLTVRGAEDLLNKPFAFEL---------------------STGEYTMYFV-ADTEKEKEEWINSIGRAI 450 NP+R GWL K G +KTW+RRWFIL L++F+ T PRG+IP+ L++R +D KP FEL G + +Y + A T++EK+EWI SI A+ Sbjct: 259 NPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVDD-PRKPNCFELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAAV 375 The following BLAST results are available for this feature:
BLAST of DC900378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900378 ID=DC900378; Name=DC900378; organism=Citrus sinensis; type=EST; length=546bpback to top |