CX043799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043799 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11 Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = -3 Query: 432 KRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXAFSMRGSSAILNFPVERVQESLKD 698 K+ +++ V + T + +RGVR+RPWGK+AAEIRD +R +RVWLGTFD+ A +RG +A LNFP V E++++ Sbjct: 66 KKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRR-VRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENVEE 153
BLAST of CX043799 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11 Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = -3 Query: 351 VSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXAFSMRGSSAILNFPVERVQESLKDMKCNTEEGCSPVVALKRKHSMRRKMVT 707 V S+ VS+TT T EK +RGVR+RPWGK+AAEIRD + +R+WLGT+++ A +RG A+ NF V + K SPV K+K++ +K VT Sbjct: 100 VKSESTVSPVVSATT--TTTGEKKFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEK-----KAPPPSPVKKKKKKNNKSKKSVT 210
BLAST of CX043799 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.968e-11 Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = -3 Query: 462 EALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXAFSMRGSSAILNFP 716 + L++ + +E SS + E P K YRGVR+RPWGK+AAEIRD + RVWLGTF++ A RGS A LNFP Sbjct: 37 QPLITGSAVTKECESSMSLERP---KKYRGVRQRPWGKWAAEIRDPHK-ATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117
BLAST of CX043799 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.968e-11 Identity = 38/81 (46.91%), Postives = 44/81 (54.32%), Query Frame = -3 Query: 462 SSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXAFSMRGSSAILNFP 704 SS K+ E + K+ YRGVR+RPWGKFAAEIRD R RVWLGTF++ A RG A LNFP Sbjct: 113 SSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKR-ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192 The following BLAST results are available for this feature:
BLAST of CX043799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043799 ID=CX043799; Name=CX043799; organism=Citrus sinensis; type=EST; length=865bpback to top |