Homology
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2)
HSP 1 Score: 314.694 bits (805), Expect = 3.252e-85
Identity = 164/184 (89.13%), Postives = 175/184 (95.11%), Query Frame = 1
Query: 178 FAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
F+VRA+ K+I+FDQ SRAA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL D MENAGAALIREVASKTNDSAGDGTTTASVLAREIIK GLLSVTSGANPVSLKRGIDKTV L+EELEKRARP++G DIKAVATISAGND+L+GTMIADAIDKVGPDGVLSIESSS
Sbjct: 2 FSVRANVKEISFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARPVKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVLSIESSS 185
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2)
HSP 1 Score: 314.309 bits (804), Expect = 4.247e-85
Identity = 162/184 (88.04%), Postives = 177/184 (96.20%), Query Frame = 1
Query: 178 FAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
F+VRA+ K+IAFDQ SRAA+QAGIDKL+D VGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL + MENAGAALIREVASKTNDSAGDGTTTAS+LAREIIK GLLSVTSGANPVSLKRGIDKTV GL+EEL+K+ARP++GRDDI+AVA+ISAGNDDLIG+MIADAIDKVGPDGVLSIESSS
Sbjct: 42 FSVRANVKEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKARPVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSS 225
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2)
HSP 1 Score: 313.923 bits (803), Expect = 5.546e-85
Identity = 163/184 (88.59%), Postives = 176/184 (95.65%), Query Frame = 1
Query: 178 FAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
F V+A+AKDIAFDQ SR+AMQAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLL+VTSGANPVS+K+GIDKTV LVEELEK ARP++G DDIKAVATISAGND+LIG MIA+AIDKVGPDGVLSIESS+
Sbjct: 43 FVVKAAAKDIAFDQHSRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLNVTSGANPVSIKKGIDKTVAALVEELEKLARPVKGGDDIKAVATISAGNDELIGKMIAEAIDKVGPDGVLSIESSN 226
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1)
HSP 1 Score: 306.99 bits (785), Expect = 6.780e-83
Identity = 161/184 (87.50%), Postives = 172/184 (93.48%), Query Frame = 1
Query: 178 FAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
F++RA+ K+IAFDQ SRAA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL D MENAGAALIREVASKTNDSAGDGTTTASVLAREIIK GLLSVTSGANPVSLKRGIDKTV L+EELEKR+RP++G DIKAVATISAGND+LIG MIADAIDKVGPDGV IESSS
Sbjct: 41 FSLRANVKEIAFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRSRPVKGGRDIKAVATISAGNDELIGAMIADAIDKVGPDGVSPIESSS 224
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1)
HSP 1 Score: 301.982 bits (772), Expect = 2.181e-81
Identity = 154/180 (85.56%), Postives = 173/180 (96.11%), Query Frame = 1
Query: 190 ASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
A AK+IAFDQ SRAA+QAG++KL++AVG+TLGPRGRNVVLDE+G+PKVVNDGVTIARAIELA+PMENAGAALIREVASKTNDSAGDGTTTA VLAREIIKLG+LSVTSGANPVSLK+GIDKTV GL+EELE++ARP++G DIKAVA+ISAGND+LIG MIADAIDKVGPDGVLSIESSS
Sbjct: 2 ADAKEIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGNPKVVNDGVTIARAIELANPMENAGAALIREVASKTNDSAGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLIEELERKARPVKGSGDIKAVASISAGNDELIGAMIADAIDKVGPDGVLSIESSS 181
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1)
HSP 1 Score: 300.442 bits (768), Expect = 6.346e-81
Identity = 154/168 (91.67%), Postives = 165/168 (98.21%), Query Frame = 1
Query: 226 RAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
R A+Q+GIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVN+GVTIARAIEL DPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KRGIDKTV GL+EELEK+ARP++GRDDIKAVA+ISAGND+LIGTMIADAIDKVGPDGVLSIESSS
Sbjct: 1 RTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSS 168
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1)
HSP 1 Score: 247.284 bits (630), Expect = 6.375e-65
Identity = 125/181 (69.06%), Postives = 158/181 (87.29%), Query Frame = 1
Query: 190 ASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
A AK+I FDQ SR +QAGI+K++DAVG+TLGPRGRNVVL++ FG P+V+NDGV+I RAIEL DP+ENAGA LI+EVA +TND+AGDGTTTASVLARE+I GL SVT+GANP+++KRG+DKT LV +L++ A+P++GRDDIK VA+ISAGND+ IG MIADA+DKVG +GVLSIE+S+
Sbjct: 34 ADAKEIVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIRRAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADALDKVGSNGVLSIETSN 214
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1)
HSP 1 Score: 219.164 bits (557), Expect = 1.859e-56
Identity = 108/178 (60.67%), Postives = 148/178 (83.15%), Query Frame = 1
Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
AK + FD+ SR A++ G++ L+DAV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ +EL DP+ENAGA L+REVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANPV+L++GIDKT+ LV+E+E +++P+ G D I VATISAGND +G MIA A+DKVG DGV+++E S
Sbjct: 2 AKHVVFDEESRRALERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPVAG-DAIAQVATISAGNDTEVGQMIAQAMDKVGKDGVITVEES 178
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1)
HSP 1 Score: 216.468 bits (550), Expect = 1.205e-55
Identity = 109/178 (61.24%), Postives = 146/178 (82.02%), Query Frame = 1
Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
AK I FD+ +R A++ G++ L+DAV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL DP+EN GA LIREVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANP+SLKRG++KTV LV+E+ A+P+E I VATIS+GND+ IG MIA+A+DKVG +GV+++E S
Sbjct: 2 AKMIVFDETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVEDNKTIAEVATISSGNDEEIGQMIAEAMDKVGKEGVITVEES 179
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match:
CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1)
HSP 1 Score: 213.386 bits (542), Expect = 1.020e-54
Identity = 105/178 (58.99%), Postives = 146/178 (82.02%), Query Frame = 1
Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
AK I F + +R A++ GI++L+DA+ +T+GP+GRNVVL++ FG+P++VNDGVTIA+ IELADP+EN GA L+REVASKTND AGDGTTTA++LA+ +++ GL ++++GANPV+L+RGI+KT LVE++ A+P+EGR I VATISAGND +G MIA A+D VG DGV+++E S
Sbjct: 2 AKRILFREEARKALEQGINQLADAIKVTIGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVASKTNDVAGDGTTTATILAQSMVREGLKNISAGANPVALRRGIEKTTAYLVEQIAAHAKPVEGRKTIAEVATISAGNDSEVGEMIAKAMDAVGRDGVITVEES 179
The following BLAST results are available for this feature:
BLAST of CX043796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 500
100 200 300 400 500 600 700 Expect = 3.25e-85 / Id = 89.13 Expect = 4.25e-85 / Id = 88.04 Expect = 5.55e-85 / Id = 88.59 Expect = 6.78e-83 / Id = 87.50 Expect = 2.18e-81 / Id = 85.56 Expect = 6.35e-81 / Id = 91.67 Expect = 6.38e-65 / Id = 69.06 Expect = 1.86e-56 / Id = 60.67 Expect = 1.21e-55 / Id = 61.24 Expect = 1.02e-54 / Id = 58.99 Sequence RUB1_BRANA RUBA_ARATH RUBA_PEA RUB2_BRANA RUBA_WHEAT RUBA_RICCO RUBA_CHLRE CH601_ACAM1 CH602_GLOVI CH602_SYNJB
Match Name E-value Identity Description
RUB1_BRANA 3.252e-85 89.13 RuBisCO large subunit-binding protein subunit alph... [more]
RUBA_ARATH 4.247e-85 88.04 RuBisCO large subunit-binding protein subunit alph... [more]
RUBA_PEA 5.546e-85 88.59 RuBisCO large subunit-binding protein subunit alph... [more]
RUB2_BRANA 6.780e-83 87.50 RuBisCO large subunit-binding protein subunit alph... [more]
RUBA_WHEAT 2.181e-81 85.56 RuBisCO large subunit-binding protein subunit alph... [more]
RUBA_RICCO 6.346e-81 91.67 RuBisCO large subunit-binding protein subunit alph... [more]
RUBA_CHLRE 6.375e-65 69.06 RuBisCO large subunit-binding protein subunit alph... [more]
CH601_ACAM1 1.859e-56 60.67 60 kDa chaperonin 1 OS=Acaryochloris marina (strai... [more]
CH602_GLOVI 1.205e-55 61.24 60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=gr... [more]
CH602_SYNJB 1.020e-54 58.99 60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 ... [more]
Pages back to top