CX043796

Overview
NameCX043796
Unique NameCX043796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_GEOSF (60 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 95/178 (53.37%), Postives = 130/178 (73.03%), Query Frame = 1
Query:  196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK I FDQ  R A   G++ L+DAV +TLGP+GRNVV+++ FG+P +  DGVT+A+ IEL D  EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGIDK V  LV EL+  ++PI+   +I  V TISA ND  IG +IA+A++KVG +GV+++E +
Sbjct:    2 AKVIKFDQEGRNAFLKGVNTLADAVKVTLGPKGRNVVIEKSFGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGIDKAVETLVAELKSISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEA 179          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_GEOMG (60 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 94/178 (52.81%), Postives = 131/178 (73.60%), Query Frame = 1
Query:  196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK I FDQ  R A+  G++ L+DAV +TLGP+GRNV++++ FGSP +  DGVT+A+ IEL D  EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGID  V  +V EL+K ++PI+   +I  V TISA ND  IG +IA+A++KVG +GV+++E +
Sbjct:    2 AKIIKFDQEGRNAILKGVNTLADAVKVTLGPKGRNVIIEKSFGSPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGIDSAVETIVAELQKISKPIKDHKEIAQVGTISANNDKTIGGIIAEAMEKVGKEGVITVEEA 179          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_ENTS8 (60 kDa chaperonin OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=groL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 94/180 (52.22%), Postives = 130/180 (72.22%), Query Frame = 1
Query:  193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A++KVG +GV+++E  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEGT 181          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_ENTFA (60 kDa chaperonin OS=Enterococcus faecalis GN=groL PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 96/178 (53.93%), Postives = 133/178 (74.72%), Query Frame = 1
Query:  196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK+I F + +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+      VEEL   +  ++ ++ I  VA +S+G++  +G +IADA++KVG DGV++IE S
Sbjct:    2 AKEIKFAEDARAAMLRGVDVLADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPLGIRRGIELATKTAVEELHNISSVVDSKEAIAQVAAVSSGSEK-VGQLIADAMEKVGNDGVITIEES 178          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_DELAS (60 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=groL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 93/177 (52.54%), Postives = 134/177 (75.71%), Query Frame = 1
Query:  193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA L++EVASKTND AGDGTTTA+VLA+ I++ G   V +G NP+ LKRGIDK V  LVEEL+K+++      +I  V +ISA +D+ +G++IA+A+DKVG +GV+++E
Sbjct:    2 AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGAKYVAAGLNPMDLKRGIDKAVAALVEELKKQSKATTTSKEIAQVGSISANSDESVGSIIAEAMDKVGKEGVITVE 178          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_CAUSK (60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 93/179 (51.96%), Postives = 133/179 (74.30%), Query Frame = 1
Query:  193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AKD+ F   +R  M  G++ L++AV +TLGP+GRNVV+++ FG+P+   DGV++A+ IELAD  EN GA +IREVASKTND AGDGTTTA+VLA+ I++ GL SV +G NP+ LKRGIDK VH +V+ ++  ++ +   ++I  V TISA  D  +G MIA A+DKVG +GV+++E +
Sbjct:    2 AAKDVYFSSDARDKMLRGVNILANAVKVTLGPKGRNVVIEKSFGAPRSTKDGVSVAKEIELADRFENLGAQMIREVASKTNDKAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGIDKAVHVVVDSIKASSKKVTTNNEIAQVGTISANGDKDVGEMIAKAMDKVGNEGVITVEEA 180          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_BURTH (60 kDa chaperonin OS=Burkholderia thailandensis GN=groL PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 93/177 (52.54%), Postives = 131/177 (74.01%), Query Frame = 1
Query:  193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG P V  DGV++A+ IEL D ++N GA +++EVASKT+D+AGDGTTTA+VLA+ I++ G+  V SG NP+ LKRGIDK V   VEEL+K ++P     +I  V +ISA +D  IG  IA+A+DKVG +GV+++E
Sbjct:    2 AAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDRIAEAMDKVGKEGVITVE 178          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH602_RHILE (60 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=groL2 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 95/179 (53.07%), Postives = 129/179 (72.07%), Query Frame = 1
Query:  193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AK+I F   +R  M  G+D L++AV  TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL D  EN GA ++REVASKT+D AGDGTTTA+VLA+ I+K G  +VTSG NP+ LKRGID  V  +V EL+  AR I    +I  V TISA  D  IG  +A+A++KVG DGV+++E +
Sbjct:    2 AAKEIKFSTEAREKMLRGVDILANAVKATLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGIDLAVAAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEA 180          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH602_ARTAT (60 kDa chaperonin 2 OS=Arthrobacter aurescens (strain TC1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 97/179 (54.19%), Postives = 135/179 (75.42%), Query Frame = 1
Query:  196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
            AK +AF+  +R +++AGIDKL++ V +TLGPRGRNVVLD+ +G+P + NDGVTIAR +EL DP EN GA L +EVA+KTND AGDGTTTA+VLA+ ++K GL +V +GA P  +KRGI+ +V  +   L + AR +EG   + +VA ISA +D+ +G ++A+A  KVG DGV++IE SS
Sbjct:    2 AKQLAFNDAARRSLEAGIDKLANTVKVTLGPRGRNVVLDKKWGAPTITNDGVTIAREVELDDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVKEGLRNVAAGAAPGEIKRGIEVSVEAVAARLLENAREVEG-TQVASVAAISAQSDE-VGELLAEAFGKVGKDGVITIEESS 178          
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 93/179 (51.96%), Postives = 134/179 (74.86%), Query Frame = 1
Query:  193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AK I F + +RAA+  G++ L+DAV +TLGP+GRNVV+++ +GSP V  DGVT+A+ +ELA  +EN GA ++REVASKT+D AGDGTTTA+VLA+ I   GL  V +G NP+ LKRGID  V  ++E ++K A+P + +D I  VAT+SA  D  IG ++ADA++KVG +GV+++E +
Sbjct:    2 AAKQIVFSRGARAAILKGVNTLADAVKVTLGPKGRNVVIEKSWGSPVVTKDGVTVAKEVELAGKLENMGAQMVREVASKTSDKAGDGTTTATVLAQAIFGEGLKLVEAGHNPMDLKRGIDAAVAKVIEAVQKAAKPTKDKDQIAQVATVSANGDKEIGQILADAMEKVGKEGVITVEEN 180          
The following BLAST results are available for this feature:
BLAST of CX043796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_GEOSF6.628e-4653.3760 kDa chaperonin OS=Geobacter sp. (strain FRC-32)... [more]
CH60_GEOMG6.628e-4652.8160 kDa chaperonin OS=Geobacter metallireducens (st... [more]
CH60_ENTS86.628e-4652.2260 kDa chaperonin OS=Enterobacter sakazakii (strai... [more]
CH60_ENTFA6.628e-4653.9360 kDa chaperonin OS=Enterococcus faecalis GN=groL... [more]
CH60_DELAS6.628e-4652.5460 kDa chaperonin OS=Delftia acidovorans (strain D... [more]
CH60_CAUSK6.628e-4651.9660 kDa chaperonin OS=Caulobacter sp. (strain K31) ... [more]
CH60_BURTH6.628e-4652.5460 kDa chaperonin OS=Burkholderia thailandensis GN... [more]
CH602_RHILE6.628e-4653.0760 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=... [more]
CH602_ARTAT6.628e-4654.1960 kDa chaperonin 2 OS=Arthrobacter aurescens (str... [more]
CH601_SORC56.628e-4651.9660 kDa chaperonin 1 OS=Sorangium cellulosum (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13D12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D12-H23-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043796 ID=CX043796; Name=CX043796; organism=Citrus sinensis; type=EST; length=729bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACGCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGATCTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTGGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGAAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATCAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCA
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