CX043796
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.600e-50 Identity = 102/179 (56.98%), Postives = 144/179 (80.45%), Query Frame = 1 Query: 193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 + K I F + +R A++ G++ L+DAV +TLGP+GRNVVL++ FGSP+++NDGV+IAR IELADP+EN GA L++EVA+KTND AGDGTTTA+VLA+ II+ GL +VT+GANP+ L++GI+K V VEE++ A+P+E + I VA ISA ND+ IG +IA+A++KVG DGV+++E S Sbjct: 2 AGKQILFREDARRALERGVNALADAVKVTLGPKGRNVVLEKKFGSPQIINDGVSIAREIELADPVENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPMILRKGIEKAVAKAVEEIKAIAKPVETSEAIAQVAAISA-NDEEIGKLIAEAMEKVGKDGVITVEES 179
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_BACTR (60 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groL PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.600e-50 Identity = 102/178 (57.30%), Postives = 141/178 (79.21%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 AK+I F + +R AM G+DKL+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V VEEL+ ++PI+G++ I VA ISA D+ +G +IA+A+++VG DGV+++E S Sbjct: 2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIEKAVAVAVEELKAISKPIQGKESIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEES 178
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_BACST (60 kDa chaperonin OS=Bacillus stearothermophilus GN=groL PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.600e-50 Identity = 102/178 (57.30%), Postives = 141/178 (79.21%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 AK+I F + +R AM G+DKL+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V VEEL+ ++PI+G++ I VA ISA D+ +G +IA+A+++VG DGV+++E S Sbjct: 2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIEKAVAVAVEELKAISKPIQGKESIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEES 178
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_GEOSW (60 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groL PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 102/178 (57.30%), Postives = 141/178 (79.21%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 AK+I F + +R AM G+DKL+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V VEEL+ ++PI+G++ I VA ISA D+ +G +IA+A+++VG DGV+++E S Sbjct: 2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIEKAVAVAVEELKAISKPIKGKESIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEES 178
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH60_CHLTE (60 kDa chaperonin OS=Chlorobium tepidum GN=groL PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 100/179 (55.87%), Postives = 136/179 (75.98%), Query Frame = 1 Query: 193 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 +AKDI FD +R ++ G+DKL++AV +TLGP GRNV++D+ FG+P DGVT+A+ IEL DP+EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +VT+GA P+ LKRGID+ V +V EL +R I G+ +I V TISA ND IG +IA+A+DKVG DGV+++E + Sbjct: 2 TAKDILFDAEARTKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELVDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEA 180
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 100/176 (56.82%), Postives = 139/176 (78.98%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720 AK I +++ +R A++ G+D L+++V +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G +LIR+ ASKTND+AGDGTTTA+VLA ++K GL +V +GANP++LKRGIDK LVE++ + AR IE I V ISAGND+ +G MIA+A+DKVG +GV+S+E Sbjct: 2 AKRIIYNENARRALEKGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHVENTGVSLIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGIDKAAGFLVEKIAEHARQIEDSKAIAQVGAISAGNDEEVGKMIAEAMDKVGKEGVISLE 177
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 99/176 (56.25%), Postives = 139/176 (78.98%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720 AK I +++ +R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA ++K GL +V +GAN +SLK+GIDK LV ++E+ A+PI + I TI+AGND+ +G MIADA+DKVG +GV+S+E Sbjct: 2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKKGIDKASDFLVSKIEELAKPISDSNAIAQCGTIAAGNDEEVGQMIADAMDKVGKEGVISLE 177
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH602_PROMA (60 kDa chaperonin 2 OS=Prochlorococcus marinus GN=groL2 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 97/176 (55.11%), Postives = 141/176 (80.11%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720 AK I +++ +R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA ++K GL +V +GAN ++LK+GIDK LV++++++A+PI + I TI+AGND+ +G MIADA+DKVG +GV+S+E Sbjct: 2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKATDFLVKKIQEQAKPISDSNAIAQCGTIAAGNDEEVGQMIADAMDKVGKEGVISLE 177
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 100/176 (56.82%), Postives = 139/176 (78.98%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720 AK I +++ +R A++ GID L+++V +TLGP+GRNVVL++ FGSP+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA ++K GL +V +GAN ++LK+GIDK LV +++ A+PI + I V TISAGND+ +G MIADA+DKVG +GV+S+E Sbjct: 2 AKRIIYNENARRALEKGIDILAESVAVTLGPKGRNVVLEKKFGSPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKASDFLVGKIKDMAKPIADSNAIAQVGTISAGNDEEVGKMIADAMDKVGKEGVISLE 177
BLAST of CX043796 vs. ExPASy Swiss-Prot
Match: CH601_SALRD (60 kDa chaperonin 1 OS=Salinibacter ruber (strain DSM 13855) GN=groL1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.396e-50 Identity = 96/178 (53.93%), Postives = 135/178 (75.84%), Query Frame = 1 Query: 196 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 AK I FD +R+A+Q G+D++++AV +TLGP+GRNVVL++ FG+P + DGVT+A+ IEL + + N GA +++E ASKTND AGDGTTTA+VLA+ +I G+ SVTSGANP+ +KRGI +V L ++ P+EG+D I VATISA NDD IG +IADA ++VG DGV+++E + Sbjct: 15 AKQIRFDSDARSALQEGVDQMAEAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEERLPNIGAQVLKEAASKTNDDAGDGTTTATVLAQSVINAGMKSVTSGANPMDVKRGITAAAEEVVTHLRNQSDPVEGKDRISQVATISANNDDAIGDLIADAFERVGQDGVITVEEA 192 The following BLAST results are available for this feature:
BLAST of CX043796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043796 ID=CX043796; Name=CX043796; organism=Citrus sinensis; type=EST; length=729bpback to top |