CX043795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.119e-12 Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + E GYNA TDK+ENM+ AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 447 APVRQIAENAGKDGSVILDKLEHQENEIGYNAATDKWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAV 518
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = -1 Query: 577 ASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 726 A E + GYNA+TD YE+++QAGVIDP KVTR ALQNAAS+AG++LTT+A+ Sbjct: 472 AKETSFGYNALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEAL 521
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + + GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 448 APVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP LIA NA + GYNAM DK EN+L AGVIDPAKVTR L N+ S+AG++LTTQA+ Sbjct: 484 APCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKVENLLDAGVIDPAKVTRNGLLNSVSIAGIMLTTQAV 555
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K S++ GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI Sbjct: 448 APLRQIADNAGEEGSVIVSRVKDSDFNVGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K E+ GYNA + +Y +ML AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 449 APLKRIAENAGQNGAVISERVKEKEFNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP +IA+NA K +E + GYNA TD YE++++AGVIDP KV R ALQNA S+AG++LTT+A+ Sbjct: 447 APLRMIANNAGMEGSVVLDKVKNTEGSFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAM 518
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K S++ GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI Sbjct: 448 APLRQIADNAGAEGSVIVSRVKDSDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12 Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K + TGY+A D + +M +AG++DPAKVTR ALQNAAS+AGMVLTT+AI Sbjct: 449 APLRRIAENAGQNGSIVLERVKDKPFNTGYDAQNDAFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTEAI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IA NA KASE G++A +KY NM++AG++DPAKVTR ALQNAASVA MVLTT+++ Sbjct: 449 PVRQIAENAGLEGSVIVEKVKASEPGIGFDAYNEKYVNMIEAGIVDPAKVTRSALQNAASVASMVLTTESV 519 The following BLAST results are available for this feature:
BLAST of CX043795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043795 ID=CX043795; Name=CX043795; organism=Citrus sinensis; type=EST; length=795bpback to top |