CX043795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + ++ G+NA +++Y +ML AG+IDPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 449 APLKRIAENAGANGSVVAENVRHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 +P IA NA K+ GYNA T +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 449 SPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K+ + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 449 APLMRIAENAGANGAVVAENVKSRAISEGYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 +P IA NA K+ GYNA T +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 449 SPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_STRSV (60 kDa chaperonin OS=Streptococcus sanguinis (strain SK36) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IA NA K SE TG+NA T ++ NM++AG+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 447 PVRQIALNAGFEGSIVIDRLKNSEVGTGFNAATGEWVNMIEAGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_STRSA (60 kDa chaperonin OS=Streptococcus sanguis GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IA NA K SE TG+NA T ++ NM++AG+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 447 PVRQIALNAGFEGSIVIDRLKNSEVGTGFNAATGEWVNMIEAGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_STRGN (60 kDa chaperonin OS=Streptococcus gordonii GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IA NA K SE TG+NA T ++ NM++AG+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 447 PVRQIALNAGFEGSIVIDRLKNSEAGTGFNAATGEWVNMIEAGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_STAAB (60 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K +E G+NA TD++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 446 APVRQIAENAGLEGSVIVERLKNAEPGVGFNAATDEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_METHJ (60 kDa chaperonin OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = -1 Query: 577 ASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 726 ASE T GYNA TD YE++LQAGV+DP KV R LQNAAS+AGM+L+T+A+ Sbjct: 471 ASE-TYGYNAKTDTYEDLLQAGVLDPTKVVRSGLQNAASIAGMLLSTEAV 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACLS (60 kDa chaperonin OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IA NA ++ + TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+ Sbjct: 447 PVRQIAANAGYEGSVIIDKLRSEKVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517 The following BLAST results are available for this feature:
BLAST of CX043795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043795 ID=CX043795; Name=CX043795; organism=Citrus sinensis; type=EST; length=795bpback to top |