CX043791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.227e-48 Identity = 98/158 (62.03%), Postives = 108/158 (68.35%), Query Frame = -1 Query: 266 RPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 736 RPTRPDKARRLGYKAKQ G YGKP + GV QLKF RS +SVAEERAGR G LRVLNSYW+ EDSTYK+FEVIL+DP H IR +P W+ PVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R NT Sbjct: 2 RPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 158
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.247e-41 Identity = 87/147 (59.18%), Postives = 97/147 (65.99%), Query Frame = -1 Query: 266 GYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 703 GYKAKQ G YGKP + GV QLKF RS +SV EERAGR G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P W+ PVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R NT Sbjct: 1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 146
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.233e-39 Identity = 86/194 (44.33%), Postives = 114/194 (58.76%), Query Frame = -1 Query: 275 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 856 MG Y ++ E W++ + +R L R ++R+ P++VR+ RPTR D+AR LGYK KQ KP GV ++ +S + +AEERA RK + VLNSYW+ ED +K++EVILVDP H AI+ DP++NWLC H+ R RGLTSAGKK RGLR KG K RPS RA +R Sbjct: 1 MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK--KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRR 192
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.966e-38 Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = -1 Query: 275 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 856 M Y +V E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA +K + VLNSYW+ +D K++EVILVDP +I+ND NWLC HK R RGLTSAGKK RGL KG KARPS RA K+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGAEKARPSVRANGKK 192
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38 Identity = 92/196 (46.94%), Postives = 110/196 (56.12%), Query Frame = -1 Query: 269 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNN 856 MGAY +V+E+ R+KQSDV+RFL RVRCWEYRQ I R +RP+RPDKARRLGYKAKQ G +GKP NQG+ QLKFQRS RS AEER R+ GGLR+LNSYWI + + + L P+ P P L GK+ RGL G+G H K+ A WKR N Sbjct: 1 MGAYKYVAEMERRKQSDVLRFLLRVRCWEYRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITKTVSTSTLKSSLSTPSTRLSVVMPVSTGSATPYTSAENLAVSHPLGKQNRGL-GRGSKHTKS--PNHAFWKRTN 193
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_THEON (50S ribosomal protein L15e OS=Thermococcus onnurineus (strain NA1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.357e-37 Identity = 83/190 (43.68%), Postives = 111/190 (58.42%), Query Frame = -1 Query: 287 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 856 MG Y ++ E W+ + + L + R ++R+ P +VRV RPTR D+AR LGY+AKQ G KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAG+K RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKKRMIKWRREPVVVRVERPTRLDRARSLGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGRKSRGLRNKGKGAEKVRPSVRA 188
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_THEGJ (50S ribosomal protein L15e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.357e-37 Identity = 83/190 (43.68%), Postives = 111/190 (58.42%), Query Frame = -1 Query: 287 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 856 MG Y ++ E W+ + + L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ G KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKKRMIKWRREPVVVRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWITGKAHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSVRA 188
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37 Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = -1 Query: 275 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 856 M Y +V E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVILVD H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRANSKK 192
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37 Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = -1 Query: 275 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 856 M Y +V E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVILVD H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRANSKK 192
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 7.479e-37 Identity = 84/190 (44.21%), Postives = 111/190 (58.42%), Query Frame = -1 Query: 287 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 856 MG Y ++ E W+ + + L + R ++R+ PS+VR+ RPTR D+AR LGY+AKQ G KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188 The following BLAST results are available for this feature:
BLAST of CX043791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043791 ID=CX043791; Name=CX043791; organism=Citrus sinensis; type=EST; length=868bpback to top |