CX043787

Overview
NameCX043787
Unique NameCX043787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_ECOL6 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O6 GN=ilvE PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1
Query:  361 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 681
            + I LD +GY+SE    N+F VK G + TP      LPGITR               E+ +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+ +
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF 289          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_ECO57 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O157:H7 GN=ilvE PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1
Query:  361 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 681
            + I LD +GY+SE    N+F VK G + TP      LPGITR               E+ +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+ +
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF 289          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAHA (D-alanine aminotransferase OS=Staphylococcus haemolyticus GN=dat PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.329e-13
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = -1
Query:  346 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETE 690
            NAG+AI   +   V+E  ++N++ +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPVVKIDG  VGDGKVGPVT+++Q+ + K  E
Sbjct:  164 NAGEAIQ-HRGETVTEGASSNVYAIKDGAIYTHPVNNYILNGITRKVIKWISEDEDIPFKEETFTVEFLKNADEVIVSSTSAEVTPVVKIDGEQVGDGKVGPVTRQLQEGFNKYIE 278          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAAW (D-alanine aminotransferase OS=Staphylococcus aureus (strain MW2) GN=dat PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  334 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGV 690
            NA +AI   +   V+E +++N + +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPV+K+DG  V DGKVGP+T+++Q+ ++K  E   +
Sbjct:  164 NAVEAIQ-HRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLRNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKYIESHSI 282          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAAS (D-alanine aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=dat PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  334 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGV 690
            NA +AI   +   V+E +++N + +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPV+K+DG  V DGKVGP+T+++Q+ ++K  E   +
Sbjct:  164 NAVEAIQ-HRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLRNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKYIESHSI 282          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAAR (D-alanine aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=dat PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  334 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGV 690
            NA +AI   +   V+E +++N + +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPV+K+DG  V DGKVGP+T+++Q+ ++K  E   +
Sbjct:  164 NAVEAIQ-HRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLRNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKYIESHSI 282          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAAC (D-alanine aminotransferase OS=Staphylococcus aureus (strain COL) GN=dat PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  334 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGV 690
            NA +AI   +   V+E +++N + +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPV+K+DG  V DGKVGP+T+++Q+ ++K  E   +
Sbjct:  164 NAVEAIQ-HRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLKNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKYIESHSI 282          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAAN (D-alanine aminotransferase OS=Staphylococcus aureus (strain N315) GN=dat PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  334 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGV 690
            NA +AI   +   V+E +++N + +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPV+K+DG  + DGKVGP+T+++Q+ ++K  E   +
Sbjct:  164 NAVEAIQ-HRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLKNADEVIVSSTSAEVTPVIKLDGEPINDGKVGPITRQLQEGFEKYIESHSI 282          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_STAAM (D-alanine aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dat PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  334 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGV 690
            NA +AI   +   V+E +++N + +K G + T P  +Y L GITR               E   ++     ADEV  + T  E+TPV+K+DG  + DGKVGP+T+++Q+ ++K  E   +
Sbjct:  164 NAVEAIQ-HRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLKNADEVIVSSTSAEVTPVIKLDGEPINDGKVGPITRQLQEGFEKYIESHSI 282          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: DAAA_BACSU (D-alanine aminotransferase OS=Bacillus subtilis GN=dat PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11
Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = -1
Query:  340 ANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEES 693
            A A +AI+L +DG V+E  ++N++ V  G V T  A+   L GITR               E  +S  E   A+E++ + T  EI PVV +DG+ +G GK GPVT+++Q  +++  +++
Sbjct:  161 AGAFEAILL-RDGVVTEGTSSNVYAVINGTVRTHPANRLILNGITRMNILGLIEKNGIKLDETPVSEEELKQAEEIFISSTTAEIIPVVTLDGQSIGSGKPGPVTKQLQAAFQESIQQA 278          
The following BLAST results are available for this feature:
BLAST of CX043787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
ILVE_ECOL63.593e-1441.67Branched-chain-amino-acid aminotransferase OS=Esch... [more]
ILVE_ECO573.593e-1441.67Branched-chain-amino-acid aminotransferase OS=Esch... [more]
DAAA_STAHA2.329e-1339.66D-alanine aminotransferase OS=Staphylococcus haemo... [more]
DAAA_STAAW2.847e-1134.17D-alanine aminotransferase OS=Staphylococcus aureu... [more]
DAAA_STAAS2.847e-1134.17D-alanine aminotransferase OS=Staphylococcus aureu... [more]
DAAA_STAAR2.847e-1134.17D-alanine aminotransferase OS=Staphylococcus aureu... [more]
DAAA_STAAC3.718e-1134.17D-alanine aminotransferase OS=Staphylococcus aureu... [more]
DAAA_STAAN4.856e-1133.33D-alanine aminotransferase OS=Staphylococcus aureu... [more]
DAAA_STAAM4.856e-1133.33D-alanine aminotransferase OS=Staphylococcus aureu... [more]
DAAA_BACSU6.342e-1134.45D-alanine aminotransferase OS=Bacillus subtilis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13D08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D08-H15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043787 ID=CX043787; Name=CX043787; organism=Citrus sinensis; type=EST; length=810bp
TTTTTTTTTTTTTTTTTATCAAACTTCGAATTAGATATTAATTATTTTTA
GACATTACAGAAGAATAGAATTTGCAGGTTCTCGGTACTTATTCAACATA
GAATTGACTTGAGTTTGCAGAGTGACAGAATCATAAAAACTAAGGCAGCA
ACATGAAATTTTATTGGCGGATACTCTGGCTTATTCATTCATGAATTTGG
AAGCAATTTCAGCTCATCATTTCCAGTCTGTGCGCCGTTGTGCCCATCAA
TAATGACAATCTTTTGAAGCTCCATCACTTCAAACATTCTGTGACCATTG
AGACATTTGAATTGACTAATAGGATGGTATTGGCACTCCTGACTCTTCTG
TCTCTTTTTTGTAAACTTTTTGAATTCTTTGAGTTACAGGCCCCACTTTT
CCATCACCAACTATGCGCCCATCGATCTTCACAACCGGTGTTATTTCTCC
CATTGTTCCAGTTGTCCAAACCTCATCCGCTGTGTGAAACTCTGATAGGC
TGATTCTGCGCTCCTCTAGGACCAGGTTTTCCTTCACCACAAGTTCCATG
ACAGTTGCTCGAGTGATACCAGGAAGGCAATAATCAGCATGAGGTGTCAA
AACACGGCCTTTCTTCACCAAAAAGATATTTGTGGCATTTGTTTCAGATA
CATAACCGTCCTTGTCAAGCATGATTGCATCACCAGCATTTGCATTATTC
CCTTCTATCTTTGCAAGTATATTATTGAGGAGGTTATTGTGGTGAATCTT
TGAATCCAAGTTATTAGGAGAATTACGACGTGTGGTTGCTGTGACCAAAT
TTACACCATG
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