DC900365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900365 vs. ExPASy Swiss-Prot
Match: PRP45_USTMA (Pre-mRNA-processing protein 45 OS=Ustilago maydis GN=PRP45 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21 Identity = 65/184 (35.33%), Postives = 106/184 (57.61%), Query Frame = 3 Query: 3 ERERERRLEAKDAAMG---KKSKITRDRDRDISEKFALGMASTGAARGGEVTFXQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYR--PKKDADDDMYGGNADEQM-EKIMKTDRF----KPDKGFAGSSER-----SGP-RDRPVEFEKEAEEADPFGLDEFLTEVEKGGKKALDK 506 ER RER+ E + + MG + ++ R+++RDISEK ALG+A A++ E RLFNQ + + +G+ +D YN+YDK LF+ + +YR + +D+Y G D + E++ K DRF +G G ++R S P R PV+FEK+ +DPF +++FL + ++G K+ D+ Sbjct: 444 ERRRERQRELRMSNMGIEQRTKQLLREQNRDISEKVALGLAKPTASK--ESMTDSRLFNQGESLAAGYGDEDSYNLYDKPLFSGSSAAAAIYRRPAARGGANDIYSGADDTALEEELGKNDRFGLGQSKFRGVQGDADRDSGSGSAPVRSGPVQFEKDT--SDPFAINQFLEDAKRGIKRTSDQ 623
BLAST of DC900365 vs. ExPASy Swiss-Prot
Match: PRP45_SCHPO (Pre-mRNA-processing protein 45 OS=Schizosaccharomyces pombe GN=prp45 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18 Identity = 63/165 (38.18%), Postives = 90/165 (54.55%), Query Frame = 3 Query: 3 ERERERRLEAKDAAMG--KKSKIT-RDRDRDISEKFALGMASTGAARGGEVTFXQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRF----KPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEV 476 ER R+ + + + MG K++K+ +DR RD++E+ ALG++ + + RLFNQ G+ SGF +D YNVYDK + A P+ STLYRP + +A ++E+I R+ K F GS E R PV FEK+ ADPFG+D FL V Sbjct: 397 ERRRQAEKDLRLSRMGAEKRAKLAEKDRPRDVAERVALGLSKPSMS--SDTMIDSRLFNQASGLGSGFQDEDSYNVYDKP-WRAAPS-STLYRPGATLSRQV---DASAELERITSESRYDVLGNAHKKFKGSDEVVESRAGPVTFEKDI--ADPFGVDTFLNNV 552
BLAST of DC900365 vs. ExPASy Swiss-Prot
Match: PRP45_YARLI (Pre-mRNA-processing protein 45 OS=Yarrowia lipolytica GN=PRP45 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.372e-13 Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 3 Query: 3 ERERERRLEAKDAAMGKKSKI---TRDRDRDISEKFALGMASTGAARGGEVTFXQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRF----KPDKGFAGSSERSGPRDRPVEFEKEAE 434 ER+RE + + + MG + KI ++ RDISE+ ALG A GE F RLF++ + GF +DQY YDK LF+AQ + ++YRP D A++ ++++ RF K KGF G+ RD PV F ++ E Sbjct: 429 ERKREAERDLRLSKMGTQQKIKQLAKENSRDISERVALGAAQPQKL-AGEAQFDSRLFSKSGSLQRGF-NEDQY--YDKSLFSAQEAVQSIYRPSASGD-----SVAEDTIDRLETEKRFDVLGKAGKGFEGADGEE--RDGPVRFVRDEE 568 The following BLAST results are available for this feature:
BLAST of DC900365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900365 ID=DC900365; Name=DC900365; organism=Citrus sinensis; type=EST; length=609bpback to top |