DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 3.644e-31 Identity = 71/177 (40.11%), Postives = 112/177 (63.28%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVT----GTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHR 572 MGRG + ++RIEN RQVTFSKRR GLLKK HE+SVLCDA + LI+FS+ GKL ++ + ME I+ER + + P + +E +E +L+ + LQ S R+ GE L ++ +L QLEH+LE S+ +R +KN+LL + + L++KE+ L+ +N+ + + ++ + Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS-SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEK 176
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.760e-31 Identity = 86/231 (37.23%), Postives = 125/231 (54.11%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQY----CTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEY---QQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHP 725 MGRG++ +KRIEN RQVTFSKRR GLLKK +ELSVLCDA++ LIIFSS GKL ++ T+ Q + + + E S ++E++ L+ + LQ + R GEDLG + +L QLE +LE ++++ R RK +L+ +Q++ LRRKER L E N + ++ + Y QQA+ E+ + P LQ+ PHQ P Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQS---WYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHSAAMDSEPTLQI---GYPHQFVP 225
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.060e-30 Identity = 72/169 (42.60%), Postives = 109/169 (64.50%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIP----EHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 M RGK +KRIEN T+RQVTFSKRR GLLKK ELSVLCDA++ LIIFS GKL ++ + M+ I+R L+ T R+ ++ + + E A + K+ +L+ S R+ GE +G+ ++L Q+E +LE SV +R RK ++ ++Q++ L++KE+ L EN + Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS--NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKL 167
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.385e-30 Identity = 72/176 (40.91%), Postives = 110/176 (62.50%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAAL 581 MGRGKI IKRIEN R VTFSKRR GL+KK E++VLCDA++ LIIF+S GK+ YC + ++++ K++G ++ + E + NE+ ++KE LQL +R GED+ S+ +L +EH +E ++KVRD + E+L + RR E+M+ EE + +Q+ A+ Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWD-AKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISK----RRNEKMMAEEQRQLTFQLQQQEMAI 171
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.385e-30 Identity = 80/209 (38.28%), Postives = 124/209 (59.33%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLK------VTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEY----QQAAMEAKPAEEHHHQVLDHF 650 MGRG+I IKRIEN T+RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS G+L +Y ++ I+R K +G + E ++++ E A LR + + LQ + + G+++ ++ +L QLE LE ++K+R RKNELL +++ + ++E L+ +N ++ I E L+ + AAME + A Q + F Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNN-NVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQQLQQVTVARSAAMELQAAAAAQQQQQNPF 208
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.385e-30 Identity = 72/196 (36.73%), Postives = 124/196 (63.27%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRI--PEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM-YRWIQEHRAALEYQQAAMEAKPAEEHHH 632 MGRGKI IKRIEN + RQVT+SKRR G++KK E+SVLCDA + +IIF+S+GK+ ++C+ + +++ K++G R+ P+H E + NE+ ++KE +Q+ +R GED+ ++ Y +L LE LE+ + +++++ E ++ +R+ M+EEEN ++ ++ Q H + ME++ +HHH Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKH---EHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFVRM----MRKHNEMVEEENQSLQFKLRQMHLDPM--NDNVMESQAVYDHHH 187
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.809e-30 Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFR--MEQIIERRLKVTGTRIP----EHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 MGRG++ +KRIEN RQVTFSKRR GLLKK +ELSVLCDA++ LIIFSS GKL ++ + +E+ G+ EH S + E++ L+ + LQ S R GEDLG + +L QLE +LE S+++ R RK +++ +Q+D+LRRKER L E N + Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQS---WYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQL 168
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.809e-30 Identity = 94/256 (36.72%), Postives = 135/256 (52.73%), Query Frame = 3 Query: 33 EQEKIRIMGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRI---PEHDSREQIF-NELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLAT---------NSIPHQIHPYHHLQLAQPNLQ 761 + E + +GRGKI IKRIEN T RQVTF KRR GLLKK +ELSVLCDA++ L+IFS+ G+L +Y R IER K + ++ Q + E + LR++ R +Q S R GE LGS+ + +L LE LE +++VR +KNELL +++ ++++E +E +++NMY + AK AE DQQ SSV+Q T + H Y + L +PN Q Sbjct: 9 DAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVR--GTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKRE--MELQHNNMY----------------LRAKIAEGAR--------LNPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQ 236
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.085e-30 Identity = 75/179 (41.90%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVT----GTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAA 578 MGRG++ +KRIEN RQVTF+KRR GLLKK +ELSVLCDA++ LI+FS+ GKL ++C+ M + +ER + + T P ++ E + E L+ + LQ S R GEDLG + +L+QLEH+L+ S+ ++R K + + QL +L++KE ML E N + ++E A+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSC-MNKTLERYQRCSYGSLETSQPSKET-ESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCAS 177
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 6.873e-30 Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKV------TGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE 566 MGRG++ +KRIEN RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ GKL ++C+ M + +E+ K T + E + + NE L+ LQ + R GEDL S+ +L+ LE +L+SS+ VR + + L QL L+RKE+M+ E N + R ++E Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQ-SMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEE 176 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |