DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 1.120e-72 Identity = 143/247 (57.89%), Postives = 187/247 (75.71%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEH-DSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHH-------HQVLDHFPFL--GDQQPSSVLQLATNSIPHQIHPYHHLQLAQPNLQD 764 MGRGKI IK+IEN T RQVTFSKRR GL+KKT ELS+LCDA IGLI+FS+TGKL ++C+E RM Q+I+R L G R+P+H D +EQ+ +E+ +LR+ET L+L +R + G DL SIP ++LD LE +LE SV KVR+RKNEL+QQQL+NL RK RMLEE+N+NMYRW+ EHRAA+E+QQA ++ KP E ++ ++ FL QQP+SVLQLAT +P +I P ++LQLAQPNLQ+ Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAMEFQQAGIDTKPGEYQQFIEQLQCYKPGEYQQFLEQQQQQPNSVLQLAT--LPSEIDPTYNLQLAQPNLQN 245
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 8.594e-65 Identity = 134/262 (51.15%), Postives = 184/262 (70.23%), Query Frame = 3 Query: 51 IMGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHH-HQ-------------VLDHFPFLGDQQ---PSSVLQLATNSI----PHQIHPYHHLQLAQPNLQDPNV 773 IMGRGKI +KRIEN T+RQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSS GKL +YC++P M QII R L+ TG +P D+R Q+++E+A +R++T LQLS++RY G+DL Y++L++LE +LE ++NK+R RK EL+QQQ++NL++ E+MLE+EN +MY+W+ ++ + + AAM+ + HH HQ +L HF F GDQ+ S+V A+ S+ + I PY LQ + PNLQD +V Sbjct: 3 IMGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQ-MYKQESAAMDHEDHHHHHEHQQAITELNLLGEQPLLSHFTFFGDQEQPSTSTVNHFASISLTSPPANSISPY-RLQPSHPNLQDSHV 262
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 7.791e-58 Identity = 122/250 (48.80%), Postives = 163/250 (65.20%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTG------TRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQ----EHRAALE--YQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHPYHHLQLAQPNLQDP 767 MGRGKI +KRIEN T+RQVTFSKRR+GL+KKTHELSVLCDAQIGLI+FS+ GKL +YCT PF M+QII+R +K G R H +Q+ EL +++ET LQL+++RY G+DL ++ +++L +LE L+ S+NKVR RK ELL +Q++NL+R E MLE+EN MY W+ + +A +E +QQ M E +++ FPF G+ L L H Y LQ QPNLQDP Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMSNQIQRQAEVEHHHQQQVMTELKLVEQQQPLMNEFPFFGEDLHLGTLPLL------DTHSY-RLQPTQPNLQDP 243
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.859e-51 Identity = 115/249 (46.18%), Postives = 155/249 (62.25%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAAL--------EYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHP---YHHLQLAQPNLQDP 767 MGRGKI IKRIEN T RQVTFSKRR GLLKK +EL+VLCDA++G++IFSSTGK+ +YC+ + ++IE+ T + E + +QI E+ ++ E +L+ +RRYTG+DL S+ DD+ LE +LE SV+KVR RK++LL QQLDNLRRKE++LE++N+ +YR I E++ A E AM P H + G + SS L S Q+H LQ QPNLQDP Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQAALTGEVKLGEMAPLAMLQPPPAFAHSAT----AYYGGESSSSGTALQLMSAAPQLHADDLGFRLQPTQPNLQDP 245
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.055e-50 Identity = 117/245 (47.76%), Postives = 161/245 (65.71%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFPFLGDQQPSSVLQLATNSIPHQIHPYHH-----LQLAQPNLQDPNV 773 MGRGKI IKRIEN T RQVTFSKRR GLLKK HELSVLCDA++GLIIFSS+GKL +Y + M++IIER KV+G RI E+D+ + ++ E+ ++ E +LQ ++RR GEDL S+ +L L +LES+ ++VR RKN+L+ QQL+NLRRKER+LE++NS++ R + E +AA+E Q +L+ F P + A N+ P +H HH LQ QPNLQ+ ++ Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITEYDN-QHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQAAVEGVQ------------EPLLEFGVFC--PPPDNKTAAAANAGP--LHLGHHLPAFRLQPTQPNLQESSI 228
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.578e-50 Identity = 116/245 (47.35%), Postives = 159/245 (64.90%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE--HRAAL--EYQQAAMEAKPAEEHHHQVLDHFP-FLGDQQPSSVLQLA--TNSIPHQIHPYHHLQLAQPNLQDP 767 MGRGKI IKRIEN T RQVTFSKRR GLLKK +EL+VLCDA++G++IFSSTGK+ +YC+ + ++IE VT T E + +QIF E+ +R E +L +RR+TG+DL ++ D++ LE +LE SV KVR RK++LL QQLDNLRRKE +LE++NS + R I E H+AA+ +A +E P +L P + G++ S+ LQL +++ LQ QPNLQDP Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKAMVEMAPV----LSMLTAAPAYYGEESSSTALQLTPPLHAVDAAAAAGFRLQPTQPNLQDP 241
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.600e-45 Identity = 106/218 (48.62%), Postives = 148/218 (67.89%), Query Frame = 3 Query: 132 GLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDHFP--FLGDQQP--SSVLQLATNSIPHQIHPYHHLQLAQPNLQDPNV 773 GLLKK EL++LCDAQ+G+IIFSS+GK+ ++ + P M +II+R K++G P +D+ +Q++ E+ ++ E +LQ +MR + GEDL S+ +++ QLE +LE SVNKVR RK +LLQQQLDNLRRKE MLEE+N +YR IQ+H A A+ME K + +LDHF + D Q SS+LQL+ Q+HP+ LQ AQPNLQD N+ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKLSGNCAPVYDN-QQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHA------ASMEQKMVDP---SMLDHFGVFYQDDHQAARSSMLQLSP-----QLHPF-RLQPAQPNLQDANL 203
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.202e-39 Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQL 497 MGRG++ +K+IENPT RQVTFSKRR GLLKK +EL++LCDAQIG+I+FS TGK+ +Y + P+R+ I +R LK TR E D +++I E+ ++ E RL++ MR+Y G+DL S+ D+ LE ++E S+ KVR RK +LL QQL Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQL 148
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.445e-37 Identity = 82/172 (47.67%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER-RLKVTGTRIPE-HDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSI-PYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWI 560 MG+GKI +KRIE+ T RQVTFSKRRAG LKK +EL+VLCDAQ+G+++FS GKL +C+ P + ++ R + TR+ E + EQ+ E+ LR E +L+ S+RR TGEDL S+ D+L QL+ +LESS++KV RK+EL+ QQL+++RR + + E+N+ + R + Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMV 172
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.881e-36 Identity = 90/250 (36.00%), Postives = 140/250 (56.00%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR----IPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAK-----------PAEEHHHQVLDH--FPFL---GDQQPSSVLQLATNSIPHQIHPYHHLQL 743 MGRG++ +KRIEN RQVTFSKRRAGLLKK HE+SVLCDA++ L++FS GKL +Y T+ ME+I+ER + + PE D E L+ + L+ + R Y GEDL ++ +L LE +L++++ +R RKN+L+ ++ L+RKE+ ++E+NS + + I+E L QQ + + P + H +L H PFL G Q +++ N + + P ++ L Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEEDPMEMRRNDLDLSLEPVYNCNL 249 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |