DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 6.418e-36 Identity = 85/225 (37.78%), Postives = 132/225 (58.67%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR----IPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAK--------PAEEHHHQVLDHFPFLGDQQPSSVLQL 692 MGRG++ +KRIEN RQVTFSKRRAGLLKK HE+SVLCDA++ L++FS GKL +Y T+ ME+I+ER + + PE D E L+ + L+ + R Y GEDL ++ +L LE +L++++ +R RKN+L+ + ++ L++KE+ ++E+NS + + I+E L QQ + + P HQ+ P++ QPS L + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQI--QHPYMLSHQPSPFLNM 222
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.210e-34 Identity = 78/183 (42.62%), Postives = 121/183 (66.12%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR---IP-EHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQ 590 MGRG++ +KRIEN RQVTFSKRR+GLLKK HE+SVLCDA++GLI+FS+ GKL +Y T+ ME+++ER + + +P +H S E A L+ LQ + + Y GEDL S+ +L LEH+L S++ +R RKN+L+ + + L++++R L+E+N+ + + ++E +E Q Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSC-MERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQ 182
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.697e-34 Identity = 76/181 (41.99%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR---IP-EHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALE 584 MGRG++ +KRIEN RQVTFSKRR+GLLKK HE+SVLCDA++GLI+FS+ GKL +Y + ME+I+ER + + +P +H S E L+ LQ + + Y GEDL S+ +L LEH+L+S++ +R RKN+L+ + + L++K+R L+E+N+ + + ++E + + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSC-MERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKSAQ 180
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.522e-34 Identity = 76/183 (41.53%), Postives = 120/183 (65.57%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR---IP-EHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQ 590 MGRG++ +KRIEN RQVTFSKRR+GLLKK HE+SVLCDA++GLI+FS+ GKL +Y + ME+++ER + + +P +H S E A L+ LQ + + Y GEDL S+ +L LEH+L+S++ +R RKN+L+ + + L++++R L+E+N+ + + ++E + Q Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSC-MERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQ 182
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 5.085e-33 Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER--RLKVTGTRIPEHDSREQIFN----ELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAME 605 MGRG++ +KRIEN RQVTFSKRR GLLKK E+SVLCDA++ LI+FS GKL +Y +E ME+++ER R ++ DS E + L+ + L+ + R Y GE+L + DL LE +LE+++ +R RKN+L+ + L++L+RKE+ ++EENS + + I+E L +Q E Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESC-MEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCE 189
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.642e-33 Identity = 75/187 (40.11%), Postives = 119/187 (63.64%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER--RLKVTGTRIPEHD--SREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAM 602 MGRG++ +KRIEN RQVTFSKRR+GLLKK HE+SVLCDA++ LI+FSS GKL +Y T+ ME+I+ER R + ++ D E E A L+ L+ + R + GEDL S+ +L LEH+L++++ +R RKN+ + + + L++K++ L++ N+++ + I+E Q+ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSC-MERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQL 186
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 8.675e-33 Identity = 75/187 (40.11%), Postives = 119/187 (63.64%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER--RLKVTGTRIPEHD--SREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAM 602 MGRG++ +KRIEN RQVTFSKRR+GLLKK HE+SVLCDA++ L+IFSS GKL +Y T+ ME+I+ER R + ++ D E E A L+ L+ + R + GEDL S+ +L LEH+L +++ +R RKN+ + + + L++K+++L++ N+ + + I+E +Q+ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSC-MEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQL 186
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 1.133e-32 Identity = 77/191 (40.31%), Postives = 121/191 (63.35%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR----IPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKP 614 MGRGK+ +KRIEN RQVTFSKRR+GLLKK +E+SVLCDA++ LIIFS+ GKL +Y T+ M++I+ER + + E D++ +E L+ + +Q + GEDL S+ +L QLE +LE+S+ +R RK++L+ + ++ L+RKE+ L+EEN + + + E + + Q + +P Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSC-MDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQTQP 190
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.480e-32 Identity = 77/191 (40.31%), Postives = 121/191 (63.35%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTR----IPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKP 614 MGRGK+ +KRIEN RQVTFSKRR+GLLKK +E+SVLCDA++ LIIFS+ GKL +Y T+ M++I+ER + + E D++ +E L+ + +Q + GEDL S+ +L QLE +LE+S+ +R RK++L+ + ++ L+RKE+ L+EEN + + + E + + Q + +P Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSC-MDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQTQP 190
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.932e-32 Identity = 84/206 (40.78%), Postives = 120/206 (58.25%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVT-GTRIPEHDSREQIFNELA------VLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM-YRWIQEHRAALEYQQAAMEAKPAEEHHHQVLDH 647 MGRG++ +KRIEN RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ GKL ++C+ M + +ER K G P SRE + EL+ L++ LQ + R GEDLG + +L+ LE +L+SS+ ++R + + + QL++L+ KERML E N + R ++ L+ E HHHQ H Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQMPLQLNPNQEEVDHYGRHHHQQQQH 205 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |